Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006828_P001 | Maize | nucleus | 80.86 | 80.52 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 65.09 | 65.16 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 64.98 | 64.78 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 64.77 | 64.5 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 64.56 | 64.09 |
| Os07t0603300-01 | Rice | nucleus | 63.3 | 64.04 |
| CDX81888 | Canola | nucleus | 26.39 | 30.17 |
| CDY59655 | Canola | nucleus | 25.66 | 29.22 |
| Bra031037.1-P | Field mustard | nucleus | 25.66 | 29.22 |
| CDX83829 | Canola | cytosol | 24.71 | 28.62 |
| CDY49132 | Canola | nucleus | 27.34 | 28.29 |
| CDY42438 | Canola | nucleus | 27.97 | 28.27 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.1 | 28.17 |
| CDX96710 | Canola | nucleus | 25.03 | 27.17 |
| CDY43253 | Canola | nucleus | 23.45 | 26.8 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 30.81 | 26.66 |
| Bra008136.1-P | Field mustard | nucleus | 28.08 | 26.59 |
| Bra039160.1-P | Field mustard | nucleus | 22.82 | 26.46 |
| CDX91979 | Canola | nucleus | 23.55 | 26.2 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 24.82 | 26.05 |
| CDX85545 | Canola | nucleus | 21.98 | 26.03 |
| CDY60473 | Canola | nucleus | 22.5 | 25.91 |
| AT1G74160.1 | Thale cress | nucleus | 27.76 | 25.76 |
| Bra001034.1-P | Field mustard | nucleus | 23.13 | 25.67 |
| KRG93656 | Soybean | nucleus | 26.39 | 25.4 |
| KRH63201 | Soybean | nucleus | 29.34 | 25.34 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 26.08 | 25.33 |
| CDX74270 | Canola | nucleus | 22.82 | 25.32 |
| KRH54713 | Soybean | nucleus | 29.34 | 25.27 |
| Bra008689.1-P | Field mustard | nucleus | 23.76 | 25.22 |
| CDX69516 | Canola | nucleus | 23.66 | 25.11 |
| Zm00001d019700_P006 | Maize | nucleus | 27.87 | 24.88 |
| Bra023526.1-P | Field mustard | nucleus | 22.19 | 24.79 |
| KRH18379 | Soybean | nucleus | 25.66 | 24.77 |
| AT1G18620.2 | Thale cress | nucleus | 26.08 | 24.46 |
| KRH56796 | Soybean | nucleus | 27.02 | 24.45 |
| Zm00001d005297_P006 | Maize | nucleus | 28.18 | 24.36 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 17.46 | 23.95 |
| PGSC0003DMT400063076 | Potato | nucleus | 27.44 | 23.9 |
| Solyc03g115000.2.1 | Tomato | nucleus | 27.44 | 23.9 |
| KRH03155 | Soybean | nucleus | 26.18 | 23.71 |
| AT3G02170.1 | Thale cress | nucleus | 22.5 | 23.65 |
| CDY26440 | Canola | nucleus | 21.98 | 23.4 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.24 | 23.39 |
| KRH45061 | Soybean | nucleus | 23.87 | 23.33 |
| CDX90985 | Canola | nucleus | 20.93 | 23.33 |
| AT5G15580.1 | Thale cress | nucleus | 22.61 | 23.19 |
| KRH01314 | Soybean | nucleus | 23.66 | 23.1 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.19 | 22.12 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.4 | 21.25 |
Protein Annotations
| EnsemblPlants:Zm00001d022072_P001 | EnsemblPlants:Zm00001d022072_T001 | EnsemblPlantsGene:Zm00001d022072 | EntrezGene:103633403 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 |
| InterPro:LNG1/2 | ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:ONM59453.1 |
| SEG:seg | UniParc:UPI0004DE8DC4 | UniProt:A0A1D6IJ10 | MapMan:13.4.1.2.2 | : | : |
Description
GRMZM2G370081Protein LONGIFOLIA 2
Coordinates
chr7:-:169436693..169442713
Molecular Weight (calculated)
104664.0 Da
IEP (calculated)
9.773
GRAVY (calculated)
-0.699
Length
951 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAGTTRGDG GTRGLQRRFG CMAGIFQIFD RHRLIAGAGR RAARQAQKRL PPPSSAPPGK TQHPKSSSDV LVQSSSASKI VLEKTLSKCT TENSSLSIES
101: SSDSSSSSPC TSFSSLDGNK SVQQELPYTS EELFAQRPLK SSPSLREPDM NAKSGHPNAG FRDIVKDCIN RDSGGLTVKT SVHEARRNGQ HKDSPRPLLL
201: SKSMDGTCII GIDRTTNVPA NVNGSRRCLQ EQSRFSCDDR RLLRPTETQE SKRSSSRPKE LPRLSLDSRK ESLSPGSRQK DLGYKRTDDI LLDTLRPQDS
301: PSHSRANSVI AKLMGLEEAT NATGVLTADS CEPTRSPRPA QTTQYGHPSR SPRGTCQDSC SMQLKNESSV LKTKPSPRIL TEAAPWRQQE RSVTNICREA
401: EGRPRIASVY ADIERRVGGF DFLECNNKDF RALRILGALN VRDAKNKNDS SGRPMATHRT GYDLTTSGSF QAPIVVMKPA GTTEKHGVSL ASVAPIAGLR
501: SLRKLPARYS SFTGTNEAST NENIHLQMSR AQLKSEETVS SASSPRPTSS SNPRNVLKKA EPERRSRPPV SPKSPSKKSN EAVSPKGRTR SKPSQVKSHR
601: DEVLHSTGNR ISLAKQVDVS VIDCPKPPGG NSTFVPPSNA AATASHKAPS ILDSDQNIHS LDNIPSPVSV LDTSFYHKRI SDSFKDGETH SSEECWNPNS
701: LPDTPQSKAS SEANQIKPEN LEVLIQKLEQ LQSMNEEDAS IKEVMASVTA NKDHQYIYEI LLASGLLHKE HSITALPAQL QTSNYPINPE LFLILEQTKP
801: DLVFAFQAVS GTKKTCKPYT GKLHRRLVFD LVNETIAQKM IICRSGSQPA KFLQSRKLSG WQLFKDLCTE VDRQIKCTGE EENGNMILDE DTVNGTKDWM
901: SFDTMLHGIV WEIERSIFKG LIDEVIGGET IEKMQFGQRK LQRQLSFSSI N
101: SSDSSSSSPC TSFSSLDGNK SVQQELPYTS EELFAQRPLK SSPSLREPDM NAKSGHPNAG FRDIVKDCIN RDSGGLTVKT SVHEARRNGQ HKDSPRPLLL
201: SKSMDGTCII GIDRTTNVPA NVNGSRRCLQ EQSRFSCDDR RLLRPTETQE SKRSSSRPKE LPRLSLDSRK ESLSPGSRQK DLGYKRTDDI LLDTLRPQDS
301: PSHSRANSVI AKLMGLEEAT NATGVLTADS CEPTRSPRPA QTTQYGHPSR SPRGTCQDSC SMQLKNESSV LKTKPSPRIL TEAAPWRQQE RSVTNICREA
401: EGRPRIASVY ADIERRVGGF DFLECNNKDF RALRILGALN VRDAKNKNDS SGRPMATHRT GYDLTTSGSF QAPIVVMKPA GTTEKHGVSL ASVAPIAGLR
501: SLRKLPARYS SFTGTNEAST NENIHLQMSR AQLKSEETVS SASSPRPTSS SNPRNVLKKA EPERRSRPPV SPKSPSKKSN EAVSPKGRTR SKPSQVKSHR
601: DEVLHSTGNR ISLAKQVDVS VIDCPKPPGG NSTFVPPSNA AATASHKAPS ILDSDQNIHS LDNIPSPVSV LDTSFYHKRI SDSFKDGETH SSEECWNPNS
701: LPDTPQSKAS SEANQIKPEN LEVLIQKLEQ LQSMNEEDAS IKEVMASVTA NKDHQYIYEI LLASGLLHKE HSITALPAQL QTSNYPINPE LFLILEQTKP
801: DLVFAFQAVS GTKKTCKPYT GKLHRRLVFD LVNETIAQKM IICRSGSQPA KFLQSRKLSG WQLFKDLCTE VDRQIKCTGE EENGNMILDE DTVNGTKDWM
901: SFDTMLHGIV WEIERSIFKG LIDEVIGGET IEKMQFGQRK LQRQLSFSSI N
001: MAAKLLHTLA DENSDLQKKI GCMNGIFQIF DRHHILTSRR KSLTLGNAHV NSINFERDSV DAICQQRSAF QCQDSNLVSS NGLSEKLTRL STECSRVSFS
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
101: SSCSSSSPLS SEVNREVQPE ISADDRVIFP ESPTSDPVMS QGTGARVGLD LRDVVRDSMY REARGLSDVC RQNRREDSPR PYGLKQSRPV DFNESCRALA
201: KLRKTSHHYY NEVDMKDTSR YYVDSRGKSK SGKKLKELPR LSLDSRDHVD LKSGNKLSES FSRSSSMNKV SGSPKRPPSV VAKLMGLETL PGSPLSRDRF
301: NMFDDNSDPF ARSLRENSLN RSLRFSPSSP RSLGKDPAAS SSSPRWRSSE FVMKPLSSLR YPIEPAPWKQ TERNRFSQKQ ACRSVKSLSQ SMEGKLKDLE
401: VKHSGKDLRA LKDILEAMQS KGLFDTRKQQ QCSNLEAQRD YELADSATSK HDSIDLRNPV IPSNMRGPIV IMKPARLVEK SGIPSSSLIP IHSLSGLNKT
501: CREEPVNVRR SSTSRKAVKD RSPGNQRAEP CISSDKKSSS RNVMSSQVYK ESTSKNSGPA SSKLQQMKPE HDKRSRPPAS PSDSSKLRKQ ISRQPVESTT
601: SPGGRRSRPR DQRSLQQNDG QLSQMSNKSR TKIEATLSIE NGGKSPSVIE AAKAVVSNLI QNKSSPTFSE DGSSEHPSPV SVLNAEIYRE IEPSPVKIQA
701: SEGSVNGSIN SGVEHCEEDQ WNPAYSFSKT TTSFSPEMNR KKLQNVEHLV QKLKRLNSSH DETSQDYIAS LCENSDPDTD HRYISEILLA SGLLLRDLGS
801: GLTTFQLHPS GHPINPELFL VIEQTKGCSS SSNEKINRKL VFDAVNEMLG KKLAFVESYV DPWMKQAKAR KKVLSAQNLL KELCSEIEIL QKQAKKRSEN
901: LLLLEEEEEE EEDFLKCILD EDMAIQSEKW TDFDDAIPGL VLDMERLLFK DLVKEIVHGE IDRLQGNSRR QKTVLADE
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT1G18620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.