Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01314 | Soybean | nucleus | 83.56 | 83.47 |
| KRH18379 | Soybean | nucleus | 52.52 | 51.88 |
| KRG93656 | Soybean | nucleus | 52.21 | 51.42 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.98 | 40.85 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 36.18 | 35.96 |
| CDX85545 | Canola | nucleus | 27.24 | 33.0 |
| Bra023526.1-P | Field mustard | nucleus | 28.06 | 32.08 |
| KRH63201 | Soybean | nucleus | 36.07 | 31.88 |
| KRH54713 | Soybean | nucleus | 36.07 | 31.79 |
| KRH03155 | Soybean | nucleus | 33.92 | 31.43 |
| PGSC0003DMT400003717 | Potato | nucleus | 30.42 | 31.32 |
| Bra008689.1-P | Field mustard | nucleus | 28.78 | 31.25 |
| CDX91979 | Canola | nucleus | 27.24 | 30.99 |
| Bra001034.1-P | Field mustard | nucleus | 27.13 | 30.81 |
| CDX69516 | Canola | nucleus | 28.37 | 30.8 |
| CDY60473 | Canola | nucleus | 26.1 | 30.75 |
| Bra039160.1-P | Field mustard | nucleus | 25.9 | 30.73 |
| CDX74270 | Canola | nucleus | 26.93 | 30.57 |
| KRH56796 | Soybean | nucleus | 32.79 | 30.35 |
| AT5G15580.1 | Thale cress | nucleus | 28.88 | 30.31 |
| CDX90985 | Canola | nucleus | 26.41 | 30.13 |
| CDY43253 | Canola | nucleus | 25.59 | 29.93 |
| Solyc02g089050.2.1 | Tomato | nucleus | 22.51 | 29.84 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 29.7 | 29.58 |
| CDY26440 | Canola | nucleus | 27.03 | 29.45 |
| AT3G02170.1 | Thale cress | nucleus | 26.72 | 28.73 |
| EER98557 | Sorghum | nucleus | 28.47 | 25.55 |
| Os07t0603300-01 | Rice | nucleus | 24.36 | 25.21 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 17.78 | 24.96 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 24.46 | 24.95 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 24.36 | 24.74 |
| Zm00001d005297_P006 | Maize | nucleus | 27.85 | 24.64 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 24.05 | 24.63 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 26.82 | 24.48 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 27.03 | 24.44 |
| Zm00001d019700_P006 | Maize | nucleus | 26.72 | 24.41 |
| Os03t0418700-02 | Rice | nucleus | 23.23 | 24.41 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 23.84 | 24.29 |
| KXG36646 | Sorghum | nucleus | 23.84 | 24.19 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 26.62 | 24.14 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 26.62 | 24.12 |
| Zm00001d006828_P001 | Maize | nucleus | 23.54 | 23.98 |
| Os07t0109400-01 | Rice | nucleus | 26.82 | 23.97 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 23.33 | 23.87 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 21.99 | 23.62 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.55 | 23.04 |
| KXG39125 | Sorghum | plastid | 20.66 | 22.02 |
Protein Annotations
| EntrezGene:100808151 | MapMan:13.4.1.2.2 | EMBL:ACUP02004986 | ncoils:Coil | InterPro:DUF3741-assoc | InterPro:DUF4378 |
| EnsemblPlantsGene:GLYMA_08G247500 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0040007 | GO:GO:0051513 | UniProt:K7L8P6 | ProteinID:KRH45060.1 | EnsemblPlants:KRH45061 | ProteinID:KRH45061 |
| ProteinID:KRH45061.1 | InterPro:LNG1/2 | PFAM:PF14309 | PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 |
| UniParc:UPI000233922F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:21444285..21450089
Molecular Weight (calculated)
109025.0 Da
IEP (calculated)
9.836
GRAVY (calculated)
-0.836
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKALKSLK DENPDLQKQI GCITGFFQLF DRHRFLTGQR SATYVQHRPT SGGSSNEIKE LNGTKQEAKA KNLKTAREKQ QFSTESSITS FSSSSCSSSM
101: SSHEFNKTIQ IQSPSRNRIR IPENTNSKAA KKQPDTPHQQ SLHFHHIVND SMHKETQGLS VKIGAKEEKK GQTNALKHID SPRPLQSHKY VNAGVTVASE
201: PLHTIAKSKK KPWDSPRLSY DETFKSATKH KELPRLSLDS REGSNRGFNE GNKSHNQLKG SPRGYGRNSS TMINHLQEQE TSKRSSSVVA KLMGLEALPE
301: CTQTCGSPMG TSSCSSKKNE LLARSSTSDE KQHQRFSLPQ SRRADSIANV TPCSRFALEP TPWRQPDESQ SSPLQASKGS ESDIKASKSS LTVYGEIEKR
401: VAELEFKKSG KDLRALKQIL EAMQRHKDSV DISRDHASNS PSDNRNCTNL NESSKSQSPR VRQKDPASVT VEMSNSTRVS KLPIVIMKPS KVTRKPNNPS
501: STEISIHAKS GPSKCSPSNP TNGRLVDRQT TIGISSTTKN IKDPFGQQVL SSDKNNMRTS KLMQSLKVSQ DNTGECTTNS GYTTVTGSPR LQKKFGLERC
601: SQPTSPSSDS RINRRGHDRQ PVELSSPSTT PRHKFSTLQQ RNERFTEISC HLRDFKHHVN IISDFDNKSS SASHSDIEVI RIDQSRKIIS SSIQLSGMNQ
701: NNAFEELRKA ETMITAEQPS PVSVLDAAFY RDDPPSPVKK KSDISKNLGE ALSTDEDSEE SSVDLLQEIE WIDEKLINFN NTRDPDHKYI AEILLASGLL
801: SGHSYSQIFH SPGHLVDPKL FFALEQMKTK MHFNIKDSAK KIRRIINPEK MQRKLIFDVV NDILVQKLIL DNSSALWCQP NELAGTTLKG KQLLDELCTE
901: IDQLQPQNRN FSLVHEDENL KHHHAIWTNC CNEMPNIVLD IERLIFKDLI TEVVRGEVAN HSGRHCRQLV FYN
101: SSHEFNKTIQ IQSPSRNRIR IPENTNSKAA KKQPDTPHQQ SLHFHHIVND SMHKETQGLS VKIGAKEEKK GQTNALKHID SPRPLQSHKY VNAGVTVASE
201: PLHTIAKSKK KPWDSPRLSY DETFKSATKH KELPRLSLDS REGSNRGFNE GNKSHNQLKG SPRGYGRNSS TMINHLQEQE TSKRSSSVVA KLMGLEALPE
301: CTQTCGSPMG TSSCSSKKNE LLARSSTSDE KQHQRFSLPQ SRRADSIANV TPCSRFALEP TPWRQPDESQ SSPLQASKGS ESDIKASKSS LTVYGEIEKR
401: VAELEFKKSG KDLRALKQIL EAMQRHKDSV DISRDHASNS PSDNRNCTNL NESSKSQSPR VRQKDPASVT VEMSNSTRVS KLPIVIMKPS KVTRKPNNPS
501: STEISIHAKS GPSKCSPSNP TNGRLVDRQT TIGISSTTKN IKDPFGQQVL SSDKNNMRTS KLMQSLKVSQ DNTGECTTNS GYTTVTGSPR LQKKFGLERC
601: SQPTSPSSDS RINRRGHDRQ PVELSSPSTT PRHKFSTLQQ RNERFTEISC HLRDFKHHVN IISDFDNKSS SASHSDIEVI RIDQSRKIIS SSIQLSGMNQ
701: NNAFEELRKA ETMITAEQPS PVSVLDAAFY RDDPPSPVKK KSDISKNLGE ALSTDEDSEE SSVDLLQEIE WIDEKLINFN NTRDPDHKYI AEILLASGLL
801: SGHSYSQIFH SPGHLVDPKL FFALEQMKTK MHFNIKDSAK KIRRIINPEK MQRKLIFDVV NDILVQKLIL DNSSALWCQP NELAGTTLKG KQLLDELCTE
901: IDQLQPQNRN FSLVHEDENL KHHHAIWTNC CNEMPNIVLD IERLIFKDLI TEVVRGEVAN HSGRHCRQLV FYN
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.