Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G261000.1 | Wheat | cytosol | 94.75 | 94.13 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 93.81 | 92.94 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 91.65 | 90.97 |
| Os07t0109400-01 | Rice | nucleus | 67.45 | 66.02 |
| EER98557 | Sorghum | nucleus | 63.41 | 62.36 |
| Zm00001d019700_P006 | Maize | nucleus | 61.16 | 61.22 |
| Zm00001d005297_P006 | Maize | nucleus | 59.29 | 57.45 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 33.58 | 36.64 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.35 | 35.21 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 34.8 | 33.76 |
| CDY42438 | Canola | nucleus | 29.55 | 33.48 |
| Solyc03g115000.2.1 | Tomato | nucleus | 33.96 | 33.15 |
| PGSC0003DMT400063076 | Potato | nucleus | 33.86 | 33.06 |
| CDY49132 | Canola | nucleus | 28.42 | 32.97 |
| KRH63201 | Soybean | nucleus | 33.68 | 32.61 |
| KRH54713 | Soybean | nucleus | 33.68 | 32.52 |
| KRH56796 | Soybean | nucleus | 31.43 | 31.87 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 29.27 | 31.87 |
| Bra008136.1-P | Field mustard | nucleus | 29.74 | 31.57 |
| CDX83829 | Canola | cytosol | 24.3 | 31.55 |
| KRH03155 | Soybean | nucleus | 30.96 | 31.43 |
| CDX81888 | Canola | nucleus | 24.48 | 31.37 |
| AT1G74160.1 | Thale cress | nucleus | 30.02 | 31.22 |
| CDX96710 | Canola | nucleus | 25.61 | 31.16 |
| CDY59655 | Canola | nucleus | 24.02 | 30.66 |
| Bra031037.1-P | Field mustard | nucleus | 24.02 | 30.66 |
| CDY43253 | Canola | nucleus | 23.83 | 30.53 |
| CDY60473 | Canola | nucleus | 23.26 | 30.02 |
| CDX91979 | Canola | nucleus | 24.02 | 29.94 |
| CDX85545 | Canola | nucleus | 22.42 | 29.76 |
| Bra039160.1-P | Field mustard | nucleus | 22.89 | 29.76 |
| Bra008689.1-P | Field mustard | nucleus | 24.77 | 29.46 |
| AT5G15580.1 | Thale cress | nucleus | 25.61 | 29.45 |
| CDX69516 | Canola | nucleus | 24.67 | 29.35 |
| CDX74270 | Canola | nucleus | 23.45 | 29.17 |
| Bra023526.1-P | Field mustard | nucleus | 23.17 | 29.02 |
| AT3G02170.1 | Thale cress | nucleus | 24.58 | 28.95 |
| Bra001034.1-P | Field mustard | nucleus | 23.26 | 28.94 |
| CDX90985 | Canola | nucleus | 22.42 | 28.02 |
| CDY26440 | Canola | nucleus | 23.45 | 28.0 |
| KRH01314 | Soybean | nucleus | 25.14 | 27.52 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 24.3 | 27.26 |
| PGSC0003DMT400003717 | Potato | nucleus | 24.11 | 27.2 |
| KRH18379 | Soybean | nucleus | 24.95 | 27.01 |
| AT1G18620.2 | Thale cress | nucleus | 25.61 | 26.92 |
| KRH45061 | Soybean | nucleus | 24.48 | 26.82 |
| KRG93656 | Soybean | nucleus | 24.86 | 26.82 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.6 | 24.11 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G281200.2 | EnsemblPlantsGene:TraesCS2B01G281200 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF3741-assoc | InterPro:DUF4378 | InterPro:LNG1/2 |
| ncoils:Coil | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF6 | PFAM:PF14309 | PFAM:PF14383 | SEG:seg |
| MapMan:13.4.1.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:388114139..388122390
Molecular Weight (calculated)
118997.0 Da
IEP (calculated)
9.319
GRAVY (calculated)
-0.867
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAKYLQALG EDRRPDLHRQ IGCVTGILQA FDRRYPIAAH HSHKRLLPPG NALSSSPSVG EERTRYGPQI VLDKNFSKSW IENQRATSTM ETSSSSCSSF
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYLLDDTL TNTPSAQSSH PTLGIRNLVK DSIYRDSRDL SARTSTMEAV ANNRGDPATC
0201: LDESPSSDIQ GKSKGTMDIN ESLRVLAKLR ESSWSPSESG HQPRLSCDAP RFSYDGRESA SKRREMPRLS LDIKEGPLRI REMDSRPKPN MNDTERSISF
0301: GSDKESNAEI QKEQPAASKR LPSVVAKLMG LEELPEPNDT KVISPQAPKS VQERKQEHIL LPLSLSSHNE PARRQHRNLD ATIRNVPNSK FPAETAPWKQ
0401: ERIVLPRKLP KGSKGAHGKE QPAASVYSEI EKRLNDLDFQ HSNKDLRALK QILDSMQAKG LLQNKKREEA SMLKLYDDDY NNQEVTDANP RLSCNTNSNQ
0501: ISEGAPSPSM EEEESIEEKF FKSPIVIMKP ANSADLLGDA DSPVVPLRGL SDLPQLRTVN STDKRKMPKI NRAAVEQRLK SSPTVPASDR RPNGRNEVMS
0601: RKQKSSSQLM TESSSRRQQL PRDNNGMLKH KNSTSPRLPQ KKLDMERRSR LTIPSPEANK NQRQSVDKSH LDTVSPRSKV RRKLAQGEDG HHNVAKSRTR
0701: SLNQQGDDMS LMSDGSMSVV SELDIEVTSA DRSAEVNASS FQQGNQTPLG RNPQKVKTSY DANKDLSSMD HAAAVPERPS PVSVLDYSFD QENLFRTSKT
0801: SNSPNVDDQW HPSDAKSTKL TAQSEKNKLA NVASLLEKLQ QLTVSKDDDE APPVDHIAFL CETQIPDHRY VSEILLASGL LMKDLGTGLS QIQLHASGYP
0901: INPDLFLVLE QRKSGWTSKP EGVHQSRRSD DPKRAHRKLM FDAVNMLLLD KFEKETSVHA TSSLTGAREV SSGQQLVKAI CSEIEYLKTE RSRMCQEKSS
1001: SVIPDAEILH RLEGWTTSFG QQQLPGMILE IERSIFKELV DEVVRGEAAD GPQARAGRRG RRRLFA
0101: SSLDGNRSTQ QDLSSTDRML FPEKPFKCSP RLKSSPESDN GPDYLLDDTL TNTPSAQSSH PTLGIRNLVK DSIYRDSRDL SARTSTMEAV ANNRGDPATC
0201: LDESPSSDIQ GKSKGTMDIN ESLRVLAKLR ESSWSPSESG HQPRLSCDAP RFSYDGRESA SKRREMPRLS LDIKEGPLRI REMDSRPKPN MNDTERSISF
0301: GSDKESNAEI QKEQPAASKR LPSVVAKLMG LEELPEPNDT KVISPQAPKS VQERKQEHIL LPLSLSSHNE PARRQHRNLD ATIRNVPNSK FPAETAPWKQ
0401: ERIVLPRKLP KGSKGAHGKE QPAASVYSEI EKRLNDLDFQ HSNKDLRALK QILDSMQAKG LLQNKKREEA SMLKLYDDDY NNQEVTDANP RLSCNTNSNQ
0501: ISEGAPSPSM EEEESIEEKF FKSPIVIMKP ANSADLLGDA DSPVVPLRGL SDLPQLRTVN STDKRKMPKI NRAAVEQRLK SSPTVPASDR RPNGRNEVMS
0601: RKQKSSSQLM TESSSRRQQL PRDNNGMLKH KNSTSPRLPQ KKLDMERRSR LTIPSPEANK NQRQSVDKSH LDTVSPRSKV RRKLAQGEDG HHNVAKSRTR
0701: SLNQQGDDMS LMSDGSMSVV SELDIEVTSA DRSAEVNASS FQQGNQTPLG RNPQKVKTSY DANKDLSSMD HAAAVPERPS PVSVLDYSFD QENLFRTSKT
0801: SNSPNVDDQW HPSDAKSTKL TAQSEKNKLA NVASLLEKLQ QLTVSKDDDE APPVDHIAFL CETQIPDHRY VSEILLASGL LMKDLGTGLS QIQLHASGYP
0901: INPDLFLVLE QRKSGWTSKP EGVHQSRRSD DPKRAHRKLM FDAVNMLLLD KFEKETSVHA TSSLTGAREV SSGQQLVKAI CSEIEYLKTE RSRMCQEKSS
1001: SVIPDAEILH RLEGWTTSFG QQQLPGMILE IERSIFKELV DEVVRGEAAD GPQARAGRRG RRRLFA
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.