Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49132 | Canola | nucleus | 88.74 | 90.86 |
| Bra008136.1-P | Field mustard | nucleus | 92.77 | 86.95 |
| AT1G74160.1 | Thale cress | nucleus | 79.38 | 72.88 |
| CDX81888 | Canola | nucleus | 50.16 | 56.73 |
| CDY59655 | Canola | nucleus | 48.25 | 54.37 |
| CDX96710 | Canola | nucleus | 48.99 | 52.63 |
| CDX83829 | Canola | cytosol | 44.95 | 51.52 |
| KRH63201 | Soybean | nucleus | 50.37 | 43.05 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 49.95 | 42.77 |
| KRH54713 | Soybean | nucleus | 50.05 | 42.66 |
| Solyc03g115000.2.1 | Tomato | nucleus | 47.18 | 40.66 |
| KRH03155 | Soybean | nucleus | 45.27 | 40.57 |
| PGSC0003DMT400063076 | Potato | nucleus | 46.97 | 40.48 |
| KRH56796 | Soybean | nucleus | 45.06 | 40.34 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 36.13 | 34.8 |
| CDX85545 | Canola | nucleus | 28.37 | 33.25 |
| CDX91979 | Canola | nucleus | 30.07 | 33.1 |
| CDX74270 | Canola | nucleus | 29.44 | 32.32 |
| CDX90985 | Canola | nucleus | 29.22 | 32.24 |
| CDY60473 | Canola | nucleus | 28.16 | 32.08 |
| CDX69516 | Canola | nucleus | 29.86 | 31.36 |
| CDY43253 | Canola | nucleus | 27.63 | 31.25 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 30.5 | 30.21 |
| CDY26440 | Canola | nucleus | 28.59 | 30.12 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 30.5 | 30.08 |
| Os07t0603300-01 | Rice | nucleus | 29.86 | 29.89 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 30.18 | 29.65 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 30.07 | 29.63 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 33.48 | 29.55 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 33.58 | 29.42 |
| Os03t0418700-02 | Rice | nucleus | 28.91 | 29.37 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 33.58 | 29.37 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 33.48 | 29.36 |
| KXG36646 | Sorghum | nucleus | 29.76 | 29.2 |
| Zm00001d019700_P006 | Maize | nucleus | 32.73 | 28.92 |
| EER98557 | Sorghum | nucleus | 33.16 | 28.78 |
| Os07t0109400-01 | Rice | nucleus | 33.26 | 28.74 |
| Zm00001d006828_P001 | Maize | nucleus | 29.01 | 28.59 |
| Zm00001d005297_P006 | Maize | nucleus | 32.84 | 28.09 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 28.27 | 27.97 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 26.89 | 27.92 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 25.61 | 27.77 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 20.09 | 27.27 |
| KXG39125 | Sorghum | plastid | 23.49 | 24.21 |
Protein Annotations
| MapMan:13.4.1.2.2 | UniProt:A0A078I059 | EnsemblPlants:CDY42438 | ProteinID:CDY42438 | ProteinID:CDY42438.1 | ncoils:Coil |
| InterPro:DUF3741-assoc | InterPro:DUF4378 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | EnsemblPlantsGene:GSBRNA2T00074749001 | InterPro:LNG1/2 | PFAM:PF14309 |
| PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF3 | UniParc:UPI0004EF4014 | SEG:seg | : |
Description
BnaC02g22700DBnaC02g22700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I059]
Coordinates
chrLK032524:-:203657..208292
Molecular Weight (calculated)
104638.0 Da
IEP (calculated)
9.652
GRAVY (calculated)
-0.763
Length
941 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGSGNA NSINIERDSV DTFYQAKDTF QDTNIGGNVK EKQRVSTESS RVSFSSSCSS
101: SPSSPDLNRV LPEASAYDQA HFPESPTSDS EMAEGNGFSQ LGFDLRDVVR DSMYRDARGL SLKTPMTREE VVRRSRREDS PRPYGLKQST PADLSESFRF
201: LAKLRESPHH YNEAGAKGAP ARYSVDSHDT LKSRQKLKEL PRLSLDSRER VVQNSVVDLK PVKLPESSSS SNKKRPPSVV AKLMGLETLP GSPKNLNRTI
301: RFSPSSPRSL GKDPSSPRWR NSDFVMKPLS SSRFPIEPAP WKQADRNRVL QKQPVKAAAP PEVAKFPPTV YSEMERRLND LEFKDSGKDL RALKQILEAM
401: QSKVLLDTEK QPQPSNMAAQ RDYETSNQEM TSRTRVYQSP IVIMKPAKLV EKAGIPASSL IPIHSLSGGL NKIRREKPDE KGASTSSKRM TKDSSTGKGR
501: AESSTSSSGT SKSSGSVSPR LQQKKLEHDK RSRPPTPPSD STKSRKPLNR QMAESTSPGG RRRPRAQKSL QQNDDQVSQG SNESRTSSHE MCTHSEAEAA
601: SVIEAAKAVV SNLMQNKSSP RFSEDGSSAN LSLVALEHPS PISVLDTSIY REMEPSPVKT QGYVVAHDSG DDEHCEDQWN PAYSFSATTS TFSPEINRKK
701: LQNVEHLVQK LRRLNSTHDE ANQDYIASLC ETPDPNTDHR YISEILLASG LLLRDLGSGL TTFQLHPSGH PINPELFYVL EQTKGSSNTH LLLHKEESKA
801: LNKEKLNRKL VFDTVNELLV EKLASVEATT NPLMKSSAKK VMSAQQLLKE LCSDIETLQR QATKRSENFL LEEEDDFLKS VLAEDVMIRS GNWVNFSGET
901: SGLVLDVERL VFKDLVNEIV HAETSRLQAK SGRRRTLFAE Q
101: SPSSPDLNRV LPEASAYDQA HFPESPTSDS EMAEGNGFSQ LGFDLRDVVR DSMYRDARGL SLKTPMTREE VVRRSRREDS PRPYGLKQST PADLSESFRF
201: LAKLRESPHH YNEAGAKGAP ARYSVDSHDT LKSRQKLKEL PRLSLDSRER VVQNSVVDLK PVKLPESSSS SNKKRPPSVV AKLMGLETLP GSPKNLNRTI
301: RFSPSSPRSL GKDPSSPRWR NSDFVMKPLS SSRFPIEPAP WKQADRNRVL QKQPVKAAAP PEVAKFPPTV YSEMERRLND LEFKDSGKDL RALKQILEAM
401: QSKVLLDTEK QPQPSNMAAQ RDYETSNQEM TSRTRVYQSP IVIMKPAKLV EKAGIPASSL IPIHSLSGGL NKIRREKPDE KGASTSSKRM TKDSSTGKGR
501: AESSTSSSGT SKSSGSVSPR LQQKKLEHDK RSRPPTPPSD STKSRKPLNR QMAESTSPGG RRRPRAQKSL QQNDDQVSQG SNESRTSSHE MCTHSEAEAA
601: SVIEAAKAVV SNLMQNKSSP RFSEDGSSAN LSLVALEHPS PISVLDTSIY REMEPSPVKT QGYVVAHDSG DDEHCEDQWN PAYSFSATTS TFSPEINRKK
701: LQNVEHLVQK LRRLNSTHDE ANQDYIASLC ETPDPNTDHR YISEILLASG LLLRDLGSGL TTFQLHPSGH PINPELFYVL EQTKGSSNTH LLLHKEESKA
801: LNKEKLNRKL VFDTVNELLV EKLASVEATT NPLMKSSAKK VMSAQQLLKE LCSDIETLQR QATKRSENFL LEEEDDFLKS VLAEDVMIRS GNWVNFSGET
901: SGLVLDVERL VFKDLVNEIV HAETSRLQAK SGRRRTLFAE Q
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.