Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63201 | Soybean | nucleus | 87.59 | 87.83 |
| KRH56796 | Soybean | nucleus | 57.88 | 60.8 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 59.24 | 59.51 |
| KRH03155 | Soybean | nucleus | 55.71 | 58.57 |
| CDY49132 | Canola | nucleus | 42.03 | 50.49 |
| Solyc03g115000.2.1 | Tomato | nucleus | 49.91 | 50.46 |
| PGSC0003DMT400063076 | Potato | nucleus | 49.55 | 50.09 |
| CDY42438 | Canola | nucleus | 42.66 | 50.05 |
| Bra008136.1-P | Field mustard | nucleus | 43.93 | 48.31 |
| AT1G74160.1 | Thale cress | nucleus | 44.02 | 47.41 |
| CDY59655 | Canola | nucleus | 35.24 | 46.59 |
| Bra031037.1-P | Field mustard | nucleus | 35.24 | 46.59 |
| CDX81888 | Canola | nucleus | 34.06 | 45.19 |
| CDX83829 | Canola | cytosol | 32.79 | 44.09 |
| CDX96710 | Canola | nucleus | 34.33 | 43.26 |
| AT1G18620.2 | Thale cress | nucleus | 38.5 | 41.91 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 35.87 | 40.53 |
| KRH45061 | Soybean | nucleus | 31.79 | 36.07 |
| KRH01314 | Soybean | nucleus | 31.7 | 35.93 |
| KRH18379 | Soybean | nucleus | 31.16 | 34.92 |
| KRG93656 | Soybean | nucleus | 31.25 | 34.92 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 32.52 | 33.68 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 32.43 | 33.36 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 32.43 | 33.33 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 32.43 | 33.27 |
| EER98557 | Sorghum | nucleus | 32.16 | 32.75 |
| Os07t0109400-01 | Rice | nucleus | 32.16 | 32.6 |
| Zm00001d019700_P006 | Maize | nucleus | 30.98 | 32.11 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 27.72 | 32.08 |
| Zm00001d005297_P006 | Maize | nucleus | 31.88 | 32.0 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 27.36 | 31.79 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 27.26 | 31.52 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 27.08 | 31.21 |
| Os07t0603300-01 | Rice | nucleus | 26.18 | 30.74 |
| Zm00001d006828_P001 | Maize | nucleus | 26.27 | 30.37 |
| KXG36646 | Sorghum | nucleus | 26.27 | 30.24 |
| Os03t0418700-02 | Rice | nucleus | 25.27 | 30.13 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 24.64 | 30.02 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 25.27 | 29.34 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 18.03 | 28.72 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 21.83 | 27.77 |
| KXG39125 | Sorghum | plastid | 21.65 | 26.18 |
Protein Annotations
| EntrezGene:100805643 | MapMan:13.4.1.2.2 | EMBL:ACUP02003570 | InterPro:DUF3741-assoc | InterPro:DUF4378 | EnsemblPlantsGene:GLYMA_06G204400 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 |
| GO:GO:0051513 | UniProt:K7KW76 | EnsemblPlants:KRH54713 | ProteinID:KRH54713 | ProteinID:KRH54713.1 | InterPro:LNG1/2 |
| PFAM:PF14309 | PFAM:PF14383 | PANTHER:PTHR31680 | PANTHER:PTHR31680:SF3 | UniParc:UPI0002965303 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:19248531..19253443
Molecular Weight (calculated)
122709.0 Da
IEP (calculated)
9.550
GRAVY (calculated)
-0.820
Length
1104 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAKLLHSLA DDNPDLQKQI GCMTGIFQLF DRHQVLTARR ISQKRLPSGI HHSNSPFSDG SLERDSDNIL HRQTATDTDK GVNERQRIST ESSRASFSSC
0101: SSSVSSLDCK AEAEATYDRI LFPETPSRDA AMNQSTTSPH FGYNSLDLRD VVKDSMYREA RGLSVKTTAK EESAINAAKH RDSPRPIQLS KSVDGSYRVG
0201: IDGKQSVPID LKESIRVLAK LREAPWYYVE TKELPRSSHE SKDGHWNSIS KDAPWFPYEG KETSRLSFES RETIKSTPKL KELPRHSLDS KEGSLHSYST
0301: DSKATHHSRN IYSGTSTSND KFPTLQQPSA TPSRPPSIVA KLMGLEGLPD SSLAGDAQSS STETYSAQDN GQFRRPSKNG LMRPLRLSNS PKISLKDPTS
0401: PRRKNPDLVM KPISSSRVPI EPAPWKQQDG NQSSQKPNLR GIKAPARAPD SFPSVYSEIE KRLKDLEFKQ SGRDLRALKQ ILEAMQEKGL LESRKVEQAP
0501: NVVGSQSDYE PKATNQNQNT RSVRQQNTQR NNFLSSTVKG SDSARAFESP IVIMKPAKLV EKTVIPASSV IPIGGLSGSQ KYQIGGVYVD NNKTGTSTTR
0601: VANDQSPRNI HRDASASSID KKASSSKTTR PVQSQSRPQQ LPKENSQSSV KHSRSVSPRL QQKKLELEKR SRPPAPPSDS NKPRRQSGKK ATELGSPGGR
0701: QRPKSLNLPH GDEQLSEISN ESRSLSCQGD GVSLQSDSLT VNSKMDMEVT SSLRTVEIDD SRSPSLKAAK RLISETVQKK STPRLDEEET VAELATDAPE
0801: HPSPISVLDG SVYRDDVPSP VKQISEDSKG EDAQESKENE IKDQWNPEDS LSFNSTGPLE INRKKLQNIN HLVQKLRRLN SSHDEARIDY IASLCENTNP
0901: DHRYISEILL ASGLLLRDLS SELLTFQLHS SVHPINPELF LVLEQTKASS LLSKEESIPG KDANSKLNKE KFHRKLIFDS VNEILGAKFS SSPEPWIQPN
1001: SNRLTKKTLS AQKLLKELCF EIEKIQAKKT ECSLEEEDDG LKNILCEDVL HGSESWTDFH GYLPGVVLDV ERLIFKDLVD EVVIGESTGL RVKSLVRRRK
1101: LFGK
0101: SSSVSSLDCK AEAEATYDRI LFPETPSRDA AMNQSTTSPH FGYNSLDLRD VVKDSMYREA RGLSVKTTAK EESAINAAKH RDSPRPIQLS KSVDGSYRVG
0201: IDGKQSVPID LKESIRVLAK LREAPWYYVE TKELPRSSHE SKDGHWNSIS KDAPWFPYEG KETSRLSFES RETIKSTPKL KELPRHSLDS KEGSLHSYST
0301: DSKATHHSRN IYSGTSTSND KFPTLQQPSA TPSRPPSIVA KLMGLEGLPD SSLAGDAQSS STETYSAQDN GQFRRPSKNG LMRPLRLSNS PKISLKDPTS
0401: PRRKNPDLVM KPISSSRVPI EPAPWKQQDG NQSSQKPNLR GIKAPARAPD SFPSVYSEIE KRLKDLEFKQ SGRDLRALKQ ILEAMQEKGL LESRKVEQAP
0501: NVVGSQSDYE PKATNQNQNT RSVRQQNTQR NNFLSSTVKG SDSARAFESP IVIMKPAKLV EKTVIPASSV IPIGGLSGSQ KYQIGGVYVD NNKTGTSTTR
0601: VANDQSPRNI HRDASASSID KKASSSKTTR PVQSQSRPQQ LPKENSQSSV KHSRSVSPRL QQKKLELEKR SRPPAPPSDS NKPRRQSGKK ATELGSPGGR
0701: QRPKSLNLPH GDEQLSEISN ESRSLSCQGD GVSLQSDSLT VNSKMDMEVT SSLRTVEIDD SRSPSLKAAK RLISETVQKK STPRLDEEET VAELATDAPE
0801: HPSPISVLDG SVYRDDVPSP VKQISEDSKG EDAQESKENE IKDQWNPEDS LSFNSTGPLE INRKKLQNIN HLVQKLRRLN SSHDEARIDY IASLCENTNP
0901: DHRYISEILL ASGLLLRDLS SELLTFQLHS SVHPINPELF LVLEQTKASS LLSKEESIPG KDANSKLNKE KFHRKLIFDS VNEILGAKFS SSPEPWIQPN
1001: SNRLTKKTLS AQKLLKELCF EIEKIQAKKT ECSLEEEDDG LKNILCEDVL HGSESWTDFH GYLPGVVLDV ERLIFKDLVD EVVIGESTGL RVKSLVRRRK
1101: LFGK
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.