Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006828_P001 | Maize | nucleus | 86.86 | 87.23 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 67.67 | 68.32 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 67.36 | 67.71 |
| Os07t0603300-01 | Rice | nucleus | 65.9 | 67.23 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 66.84 | 67.12 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 66.53 | 66.6 |
| KXG39125 | Sorghum | plastid | 40.46 | 42.5 |
| CDX81888 | Canola | nucleus | 26.9 | 31.01 |
| Bra031037.1-P | Field mustard | nucleus | 25.96 | 29.82 |
| CDY59655 | Canola | nucleus | 25.96 | 29.82 |
| CDY42438 | Canola | nucleus | 29.2 | 29.76 |
| CDX83829 | Canola | cytosol | 25.34 | 29.6 |
| CDY49132 | Canola | nucleus | 28.05 | 29.27 |
| CDX96710 | Canola | nucleus | 25.65 | 28.08 |
| Bra008136.1-P | Field mustard | nucleus | 29.2 | 27.89 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 31.39 | 27.39 |
| Bra039160.1-P | Field mustard | nucleus | 23.04 | 26.95 |
| AT1G74160.1 | Thale cress | nucleus | 28.68 | 26.83 |
| CDY43253 | Canola | nucleus | 23.25 | 26.8 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.98 | 26.76 |
| CDX85545 | Canola | nucleus | 22.31 | 26.65 |
| CDY60473 | Canola | nucleus | 22.94 | 26.63 |
| CDX91979 | Canola | nucleus | 23.67 | 26.55 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 25.03 | 26.49 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 27.01 | 26.46 |
| KRG93656 | Soybean | nucleus | 27.22 | 26.42 |
| KRH54713 | Soybean | nucleus | 30.24 | 26.27 |
| Bra008689.1-P | Field mustard | nucleus | 24.5 | 26.23 |
| CDX69516 | Canola | nucleus | 24.4 | 26.12 |
| KRH18379 | Soybean | nucleus | 26.8 | 26.09 |
| KRH63201 | Soybean | nucleus | 29.93 | 26.07 |
| Bra001034.1-P | Field mustard | nucleus | 23.25 | 26.02 |
| CDX74270 | Canola | nucleus | 23.04 | 25.79 |
| Bra023526.1-P | Field mustard | nucleus | 22.73 | 25.62 |
| KRH56796 | Soybean | nucleus | 27.84 | 25.4 |
| KRH03155 | Soybean | nucleus | 27.32 | 24.95 |
| Solyc03g115000.2.1 | Tomato | nucleus | 28.36 | 24.91 |
| AT1G18620.2 | Thale cress | nucleus | 26.28 | 24.85 |
| PGSC0003DMT400063076 | Potato | nucleus | 28.26 | 24.82 |
| CDX90985 | Canola | nucleus | 22.0 | 24.74 |
| EER98557 | Sorghum | nucleus | 27.95 | 24.72 |
| PGSC0003DMT400003717 | Potato | nucleus | 23.98 | 24.34 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 17.52 | 24.24 |
| CDY26440 | Canola | nucleus | 22.52 | 24.19 |
| AT5G15580.1 | Thale cress | nucleus | 23.36 | 24.16 |
| KRH01314 | Soybean | nucleus | 24.3 | 23.92 |
| KRH45061 | Soybean | nucleus | 24.19 | 23.84 |
| AT3G02170.1 | Thale cress | nucleus | 22.42 | 23.76 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 21.06 | 23.27 |
| Solyc02g089050.2.1 | Tomato | nucleus | 16.79 | 21.93 |
Protein Annotations
| EnsemblPlants:KXG36646 | EnsemblPlantsGene:SORBI_3002G367300 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 | PANTHER:PTHR31680 |
| PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:KXG36646 | ProteinID:KXG36646.2 | SEG:seg | UniParc:UPI0009DC8955 |
| UniProt:A0A1B6QFF2 | MapMan:13.4.1.2.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:72705386..72710986
Molecular Weight (calculated)
106160.0 Da
IEP (calculated)
9.971
GRAVY (calculated)
-0.720
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MPARMRGAAA GGLADDTRDL QRQMGCMAGI FQIFDRQRLI TGAGRRAARQ AQKRLPPPST PPGNTHPKSS SNVPVQSSST SKIVLEKTFS KCMTENSSLS
101: IESSRASSSS SSCSSFSSLD GNKSVQQEPP YINEELFVQR SLKSSPSLKE SDMNTKSGHP NVGFRDIVKD SINRDPGGLT VKTSVQEARR NGQYKDSPRP
201: LLLSKSMDGT CIIGIDRTTK VPANVTESRR CLQEQSRFSC DDRRLLRPAE TQESKRPPSR PKELPRLSLD SRKESLSPGS RQKNLSYRRT DDILLDTLRP
301: QDSPSHRRAN SVIAKLMGLE EATNATGVLT AENCEPTRSP RPAEATQHEH PSRSPRSTCQ DSCSMQLKND SSVLKTKPSP RIVTEAAPWR QQDRSATNIK
401: AQQCREAEGR PRTASVYADI ERRVGGFDFL ECNNKDFRAL RILGALNAKD AKSKNDSSGG SIANHRTGYD LTTNSGTFQA PIVVMKPART IEKHGVSLAS
501: VAPMAGLRSL RKLPARYSSF TSTNESSTNE KMHLRMSRAQ LKSEEIVSNA SSPRPTSSSS PRNVLKKAEP ERRSRPPVSP KSPSKKSNEA VSPKGRIRSK
601: PSQVKCHREE VLQSTGNRIS LAKQVDVSVM DRAKPLGGNS TFTPPSNAAA TASHKAPSIL GSDQNIHSLD NIPSPVSVLD TSFYHKRISD SFRDGETHSS
701: EECWNPNSLP DTPQSKASSE VNQIKPENLE VLIQKLEQLQ SMNEEDASIK EVMASVTANK DHQYIYEILL ASGLLHKEHS IAVLPGQLQP SNYPINPELF
801: LILEQTKPDL VSAFQTVSGA KKSCKPCTGR LHRRLVFDLV NETIAQKMSV CRSGRQTVKF LQSRKLSGWQ LFKDLCTEVD RLIKCSDEEE NENMIFDEDT
901: VNGTKDWMSF DTVLHGMVWE IERSIFKGLI DEVIGGETTE KMQFVQRKLQ RQLSFSSIN
101: IESSRASSSS SSCSSFSSLD GNKSVQQEPP YINEELFVQR SLKSSPSLKE SDMNTKSGHP NVGFRDIVKD SINRDPGGLT VKTSVQEARR NGQYKDSPRP
201: LLLSKSMDGT CIIGIDRTTK VPANVTESRR CLQEQSRFSC DDRRLLRPAE TQESKRPPSR PKELPRLSLD SRKESLSPGS RQKNLSYRRT DDILLDTLRP
301: QDSPSHRRAN SVIAKLMGLE EATNATGVLT AENCEPTRSP RPAEATQHEH PSRSPRSTCQ DSCSMQLKND SSVLKTKPSP RIVTEAAPWR QQDRSATNIK
401: AQQCREAEGR PRTASVYADI ERRVGGFDFL ECNNKDFRAL RILGALNAKD AKSKNDSSGG SIANHRTGYD LTTNSGTFQA PIVVMKPART IEKHGVSLAS
501: VAPMAGLRSL RKLPARYSSF TSTNESSTNE KMHLRMSRAQ LKSEEIVSNA SSPRPTSSSS PRNVLKKAEP ERRSRPPVSP KSPSKKSNEA VSPKGRIRSK
601: PSQVKCHREE VLQSTGNRIS LAKQVDVSVM DRAKPLGGNS TFTPPSNAAA TASHKAPSIL GSDQNIHSLD NIPSPVSVLD TSFYHKRISD SFRDGETHSS
701: EECWNPNSLP DTPQSKASSE VNQIKPENLE VLIQKLEQLQ SMNEEDASIK EVMASVTANK DHQYIYEILL ASGLLHKEHS IAVLPGQLQP SNYPINPELF
801: LILEQTKPDL VSAFQTVSGA KKSCKPCTGR LHRRLVFDLV NETIAQKMSV CRSGRQTVKF LQSRKLSGWQ LFKDLCTEVD RLIKCSDEEE NENMIFDEDT
901: VNGTKDWMSF DTVLHGMVWE IERSIFKGLI DEVIGGETTE KMQFVQRKLQ RQLSFSSIN
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.