Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039160.1-P | Field mustard | nucleus | 91.28 | 91.95 |
| CDY43253 | Canola | nucleus | 81.48 | 80.89 |
| CDX91979 | Canola | nucleus | 65.74 | 63.51 |
| CDX74270 | Canola | nucleus | 65.38 | 63.01 |
| AT3G02170.1 | Thale cress | nucleus | 68.16 | 62.21 |
| CDX85545 | Canola | nucleus | 48.79 | 50.19 |
| CDX69516 | Canola | nucleus | 52.78 | 48.66 |
| CDX90985 | Canola | nucleus | 49.27 | 47.71 |
| CDY26440 | Canola | nucleus | 49.27 | 45.58 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 35.47 | 29.93 |
| CDY49132 | Canola | nucleus | 31.84 | 28.62 |
| CDY42438 | Canola | nucleus | 32.08 | 28.16 |
| CDX81888 | Canola | nucleus | 27.6 | 27.4 |
| CDX83829 | Canola | cytosol | 26.76 | 26.92 |
| KRG93656 | Soybean | nucleus | 31.84 | 26.62 |
| CDY59655 | Canola | nucleus | 26.76 | 26.47 |
| PGSC0003DMT400003717 | Potato | nucleus | 30.15 | 26.35 |
| CDX96710 | Canola | nucleus | 27.72 | 26.14 |
| KRH45061 | Soybean | nucleus | 30.75 | 26.1 |
| KRH01314 | Soybean | nucleus | 30.51 | 25.87 |
| Solyc02g089050.2.1 | Tomato | nucleus | 22.88 | 25.75 |
| KRH18379 | Soybean | nucleus | 30.27 | 25.38 |
| GSMUA_Achr4P32860_001 | Banana | nucleus | 29.18 | 24.67 |
| TraesCS2D01G183400.1 | Wheat | nucleus | 27.84 | 24.11 |
| TraesCS2A01G176000.1 | Wheat | nucleus | 27.84 | 24.01 |
| HORVU2Hr1G032710.2 | Barley | cytosol | 27.72 | 23.98 |
| Solyc02g089030.1.1 | Tomato | nucleus | 2.06 | 23.94 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 19.98 | 23.81 |
| TraesCS2B01G202300.1 | Wheat | nucleus | 27.36 | 23.79 |
| Os03t0418700-02 | Rice | nucleus | 26.39 | 23.54 |
| TraesCS2B01G281200.2 | Wheat | cytosol | 30.02 | 23.26 |
| EER98557 | Sorghum | nucleus | 30.39 | 23.16 |
| Os07t0603300-01 | Rice | nucleus | 26.27 | 23.09 |
| Os07t0109400-01 | Rice | nucleus | 30.39 | 23.05 |
| Zm00001d019700_P006 | Maize | nucleus | 29.66 | 23.0 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 25.18 | 22.96 |
| KXG36646 | Sorghum | nucleus | 26.63 | 22.94 |
| HORVU2Hr1G063820.1 | Barley | cytosol | 29.42 | 22.63 |
| TraesCS2D01G262900.1 | Wheat | cytosol | 29.42 | 22.58 |
| Zm00001d022072_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 25.91 | 22.5 |
| TraesCS2A01G261000.1 | Wheat | cytosol | 29.18 | 22.46 |
| Zm00001d006828_P001 | Maize | nucleus | 25.79 | 22.3 |
| KXG39125 | Sorghum | plastid | 24.58 | 22.23 |
| Zm00001d005297_P006 | Maize | nucleus | 28.93 | 21.73 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 20.22 | 19.24 |
Protein Annotations
| EnsemblPlants:CDY60473 | EnsemblPlantsGene:GSBRNA2T00029641001 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 | ncoils:Coil |
| PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:CDY60473 | ProteinID:CDY60473.1 | SEG:seg |
| UniParc:UPI0004EF20E2 | UniProt:A0A078J9A0 | MapMan:13.4.1.2.2 | : | : | : |
Description
BnaAnng16850DBnaAnng16850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9A0]
Coordinates
chrLK033884:+:31627..34645
Molecular Weight (calculated)
93004.2 Da
IEP (calculated)
9.938
GRAVY (calculated)
-0.843
Length
826 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAKLQYNLS DENPNLNKQF GCMYGIFQVF HRQQYPARPV SSDVEKSLPP GERKEIVGEI NMESEETKLQ GKSTKKKKKS AVKEKHRVSS ESSSRPSFSS
101: SPRSSSFSST EVSTTASQFD QPGEKQIREQ PNARPMMPFD LKELVKGSIN REMRTRSEET AAFTQQQQPN SARTSSNEWN EGSGRALKFK ESHRLSYDER
201: EMRDNGYKTD SKLKETPRLS LDSRSSPPVS HRRSSSSVVA KLMGLEVIAD NFETEQRKEN LFCDSPRPQP TALQRSRSVG SIKKILPASS KFPMEPAPWK
301: QMKAGDAAPT VYGEIQKRLT QLEFNKAGKD LRALKQILEA MEKTQRTHQP VPAATSPAMN SKSTSIVVMK PATPVSTSSL QQKAALPNVN VGNTRKPQKV
401: TSGKQNIDST KSTSPKPIRS RQTLVAKSGK SQQQSVSPRM QPKKLGFERQ SRPTTPKSEP GKIQRQLGSR QQRESVSPRR KQGIKPRSSL QQPDDRLSDA
501: SSDLRSLRSG SNISLGSNGD IEVTSKHRVE RNCDFAELSL FFLLMQNPDF GTKQDRPSLK PLKVTVEQPS PVSVLDAGFD EEDSPSPVRK ISLSFKEDVA
601: LRSEESMWIN KPNGVCRSIL LPENKGPTQT DSDLLECFPD EDANFKSGDH KYISEILLAS GLLKDLEYSK ISIQLNQARL PINPGLFFFL EQNKASNMTP
701: IYNTKHRGRE FRQQQTNLTE KIRRKLIFDT VNEILAQRFK GSANPVTTME KKLEAEGLLQ TLCSEIDRLQ ENKSKCILED DEEDIIWEEL QCQGMNLKEF
801: EGENPGIVLD IERMIFRDLV SEVCFC
101: SPRSSSFSST EVSTTASQFD QPGEKQIREQ PNARPMMPFD LKELVKGSIN REMRTRSEET AAFTQQQQPN SARTSSNEWN EGSGRALKFK ESHRLSYDER
201: EMRDNGYKTD SKLKETPRLS LDSRSSPPVS HRRSSSSVVA KLMGLEVIAD NFETEQRKEN LFCDSPRPQP TALQRSRSVG SIKKILPASS KFPMEPAPWK
301: QMKAGDAAPT VYGEIQKRLT QLEFNKAGKD LRALKQILEA MEKTQRTHQP VPAATSPAMN SKSTSIVVMK PATPVSTSSL QQKAALPNVN VGNTRKPQKV
401: TSGKQNIDST KSTSPKPIRS RQTLVAKSGK SQQQSVSPRM QPKKLGFERQ SRPTTPKSEP GKIQRQLGSR QQRESVSPRR KQGIKPRSSL QQPDDRLSDA
501: SSDLRSLRSG SNISLGSNGD IEVTSKHRVE RNCDFAELSL FFLLMQNPDF GTKQDRPSLK PLKVTVEQPS PVSVLDAGFD EEDSPSPVRK ISLSFKEDVA
601: LRSEESMWIN KPNGVCRSIL LPENKGPTQT DSDLLECFPD EDANFKSGDH KYISEILLAS GLLKDLEYSK ISIQLNQARL PINPGLFFFL EQNKASNMTP
701: IYNTKHRGRE FRQQQTNLTE KIRRKLIFDT VNEILAQRFK GSANPVTTME KKLEAEGLLQ TLCSEIDRLQ ENKSKCILED DEEDIIWEEL QCQGMNLKEF
801: EGENPGIVLD IERMIFRDLV SEVCFC
001: MSAKLLYNLS DENPNLNKQF GCMNGIFQVF YRQHCPATPV TVSGGAEKSL PPGERRGSVG ETNMESDKET ERSSTKKKKS AAKEKHRVSF ESSSRPSFSS
101: SPRSSSFSSA EVSTTASQFD QPGENLIREQ PNGGLMMPYD LKELVKGSIN REIRTRGEEA SFTQQQQPIS ARSSMLLLKE SSLRSPCRSS NEWNEGRGAA
201: MKFKESHRLS YDEREMRNNG FRVGSKLKET PRLSLDSRSN SFRSPRADAA RSSCPEEPAT MTHRRSSSSV VAKLMGLEVI ADNSDTEQRR ENRFCDSPRP
301: MSRVEPTALQ RSRSVDSIKR IPASAASKFP MEPAPWKQMK AGDSALTVYG EIQKRLTQLE FKKSGKDLRA LKQILEAMEK TQQLIDESRD DGTLSTTTLM
401: QRTHKPVSAA TSPARNFKSS SIVVMKSAAP VSTSPLPQNV TLPNVKVGNS RQTRKVTSGK QNAMDLTPRP GLYKGQLDST KSNSPKTVRS RQALAADAGS
501: MTKSGRSQQH SVSPRTQPKK LGFEKQTRPT TPKSEPGKRQ LGRQQTEVAS PRRKQMIKPH STLQQPDDRL SDARSDLRSL RSDSNISLGS NVDIEVTSRH
601: RLERNCDFPE QHTPKQRSPD FGIKQDRPSL KPLKVTVEQP SPVSVLDAVF DEEDSPSPVR KISLSFKEED ALRSEESEWI NKPTSFCRSV PFPQSNRGPM
701: KPSSDHFECS PEEGADFKSG NHKYILEILL ASGILRDLEY SMISFQLHQT RLPINPGLFF ILEQNKASNV TLPDNKHRGR GFRQQQTNPT ETIRRKLVFD
801: TVNEILARKF TAEGCIKPRL IANPLKKLEK ISKEEQLLQT LCSEIDRLQQ NNSNCILEDD EEDIIWEDLQ SQSMNLKEFE GETPGIVLDI ERMIFRDLVN
901: EVCFC
101: SPRSSSFSSA EVSTTASQFD QPGENLIREQ PNGGLMMPYD LKELVKGSIN REIRTRGEEA SFTQQQQPIS ARSSMLLLKE SSLRSPCRSS NEWNEGRGAA
201: MKFKESHRLS YDEREMRNNG FRVGSKLKET PRLSLDSRSN SFRSPRADAA RSSCPEEPAT MTHRRSSSSV VAKLMGLEVI ADNSDTEQRR ENRFCDSPRP
301: MSRVEPTALQ RSRSVDSIKR IPASAASKFP MEPAPWKQMK AGDSALTVYG EIQKRLTQLE FKKSGKDLRA LKQILEAMEK TQQLIDESRD DGTLSTTTLM
401: QRTHKPVSAA TSPARNFKSS SIVVMKSAAP VSTSPLPQNV TLPNVKVGNS RQTRKVTSGK QNAMDLTPRP GLYKGQLDST KSNSPKTVRS RQALAADAGS
501: MTKSGRSQQH SVSPRTQPKK LGFEKQTRPT TPKSEPGKRQ LGRQQTEVAS PRRKQMIKPH STLQQPDDRL SDARSDLRSL RSDSNISLGS NVDIEVTSRH
601: RLERNCDFPE QHTPKQRSPD FGIKQDRPSL KPLKVTVEQP SPVSVLDAVF DEEDSPSPVR KISLSFKEED ALRSEESEWI NKPTSFCRSV PFPQSNRGPM
701: KPSSDHFECS PEEGADFKSG NHKYILEILL ASGILRDLEY SMISFQLHQT RLPINPGLFF ILEQNKASNV TLPDNKHRGR GFRQQQTNPT ETIRRKLVFD
801: TVNEILARKF TAEGCIKPRL IANPLKKLEK ISKEEQLLQT LCSEIDRLQQ NNSNCILEDD EEDIIWEDLQ SQSMNLKEFE GETPGIVLDI ERMIFRDLVN
901: EVCFC
Arabidopsis Description
LNG2Protein LONGIFOLIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S823]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.