Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0418700-02 | Rice | nucleus | 47.86 | 47.19 |
| KXG36646 | Sorghum | nucleus | 42.5 | 40.46 |
| Solyc02g089030.1.1 | Tomato | nucleus | 1.97 | 25.35 |
| CDX81888 | Canola | nucleus | 22.89 | 25.12 |
| CDY60473 | Canola | nucleus | 22.23 | 24.58 |
| Bra039160.1-P | Field mustard | nucleus | 22.02 | 24.51 |
| CDY59655 | Canola | nucleus | 22.34 | 24.43 |
| Bra031037.1-P | Field mustard | nucleus | 22.34 | 24.43 |
| CDY43253 | Canola | nucleus | 21.8 | 23.92 |
| CDX91979 | Canola | nucleus | 22.12 | 23.63 |
| Bra001034.1-P | Field mustard | nucleus | 22.12 | 23.57 |
| CDY42438 | Canola | nucleus | 24.21 | 23.49 |
| CDY49132 | Canola | nucleus | 23.55 | 23.39 |
| CDX74270 | Canola | nucleus | 21.91 | 23.34 |
| CDX85545 | Canola | nucleus | 20.48 | 23.29 |
| CDX83829 | Canola | cytosol | 20.92 | 23.26 |
| CDX96710 | Canola | nucleus | 22.02 | 22.95 |
| VIT_17s0000g05210.t01 | Wine grape | cytosol | 27.38 | 22.75 |
| Bra008136.1-P | Field mustard | nucleus | 24.97 | 22.71 |
| VIT_14s0068g00360.t01 | Wine grape | nucleus | 24.32 | 22.68 |
| KRH18379 | Soybean | nucleus | 24.21 | 22.44 |
| AT3G02170.1 | Thale cress | nucleus | 22.02 | 22.21 |
| Bra023526.1-P | Field mustard | nucleus | 20.7 | 22.21 |
| AT1G74160.1 | Thale cress | nucleus | 24.86 | 22.15 |
| KRG93656 | Soybean | nucleus | 23.88 | 22.06 |
| CDX90985 | Canola | nucleus | 20.59 | 22.04 |
| CDX69516 | Canola | nucleus | 21.36 | 21.76 |
| Bra008689.1-P | Field mustard | nucleus | 21.36 | 21.76 |
| KRH03155 | Soybean | nucleus | 24.97 | 21.71 |
| KRH54713 | Soybean | nucleus | 26.18 | 21.65 |
| KRH63201 | Soybean | nucleus | 26.07 | 21.62 |
| GSMUA_Achr4P07300_001 | Banana | cytosol | 21.36 | 21.52 |
| AT1G18620.2 | Thale cress | nucleus | 23.88 | 21.5 |
| KRH01314 | Soybean | nucleus | 22.89 | 21.46 |
| KRH56796 | Soybean | nucleus | 24.64 | 21.41 |
| GSMUA_Achr7P26670_001 | Banana | nucleus | 16.21 | 21.36 |
| AT5G15580.1 | Thale cress | nucleus | 21.47 | 21.14 |
| PGSC0003DMT400003717 | Potato | nucleus | 21.8 | 21.06 |
| Solyc03g115000.2.1 | Tomato | nucleus | 25.08 | 20.97 |
| PGSC0003DMT400063076 | Potato | nucleus | 24.97 | 20.88 |
| CDY26440 | Canola | nucleus | 20.26 | 20.72 |
| KRH45061 | Soybean | nucleus | 22.02 | 20.66 |
| GSMUA_Achr4P14410_001 | Banana | nucleus | 19.5 | 20.51 |
| EER98557 | Sorghum | nucleus | 24.32 | 20.48 |
| Solyc02g089050.2.1 | Tomato | nucleus | 15.55 | 19.35 |
Protein Annotations
| EnsemblPlants:KXG39125 | EnsemblPlantsGene:SORBI_3001G335800 | EntrezGene:8066041 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0051513 | InterPro:DUF4378 | InterPro:LNG1/2 |
| PANTHER:PTHR31680 | PANTHER:PTHR31680:SF4 | PFAM:PF14309 | ProteinID:KXG39125 | ProteinID:KXG39125.1 | SEG:seg |
| unigene:Sbi.20268 | UniParc:UPI00081ADC8A | UniProt:A0A1B6QMJ3 | MapMan:13.4.1.2.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:62429238..62434197
Molecular Weight (calculated)
101831.0 Da
IEP (calculated)
10.210
GRAVY (calculated)
-0.641
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSPRGSIH TSAAKGASLA FQSTRTSQKC RLEWQRPSPM RPRNLAARWG AWPACSTSST AAAFSPADDM VTALEPRTRT NCLQQEKSFS KSKSKSMTEN
101: STFSTESSRA SSASSSCSSL SPLANSKPVQ QKLPCINEKH VVARSRTMRS SRSFKSSDTE VKSIQQKTDF RDVVKDSINQ DSRVLAIKTK MMEQRDGLHK
201: DSPRPLLISK STDGTYVIAV DRSNVPPAYV NESSRQQRLS CDDRQLLLQV EAQDSKMPSS KHMELPRLSL DSRNESVKSS LHQKNFGYAR TDDSLIDNLK
301: YQESPSHRRA SAVVAKLMGL EETLDAPGSA RSHRPDRHTR NNYLPHTSRS ICHDLSTLQP KIQPTILKTK PSPRIVPEAA AWKQQKINTA RYYSKEGPSS
401: TSINDNVERL INLTSSECSK DLRALRILSE LHAKRSDYNA RSLNTQKAAA GQTNSAQHFQ SPVVIMKPAR GIVKKNASVA TLAGTKVHRK LRHEESTFTT
501: KTDNSDRTKT HSHNQRAHSR REEDVGSTSS PKPSRILSPR LVRKSDCGRI TQLTVPLMSP AKTSKEVSPR GKLRSRASQS NSICGHDKAM ITESKISLSK
601: QVDTNIINYS NTLNVNTTSI HQSNTTSTSN YEETLILCTD KNIHPLENIP SPVSVLDATF YQDVMSPSLR GISNSFKNVA PLTLHECWNS ISLPDTPTLK
701: KSTESNHIIP ENMKALIQKL ELLQLLSDEA PRTNDNSLIL TANKDRHYIY EILSASGLLH NELKFRIMPC LFQQPSHPIN PELFLILEQA KPTAGKLHRK
801: LIFDLAIEII AKKIYSGSSV RQPLQFIQCK KSSGWHLFKE LCSEIEMLRS EASAIRLSEE EDEESKLAKN AIREMGKWKS FGSELQGIAL GIERSIFKNL
901: IDEVISGEDM GKV
101: STFSTESSRA SSASSSCSSL SPLANSKPVQ QKLPCINEKH VVARSRTMRS SRSFKSSDTE VKSIQQKTDF RDVVKDSINQ DSRVLAIKTK MMEQRDGLHK
201: DSPRPLLISK STDGTYVIAV DRSNVPPAYV NESSRQQRLS CDDRQLLLQV EAQDSKMPSS KHMELPRLSL DSRNESVKSS LHQKNFGYAR TDDSLIDNLK
301: YQESPSHRRA SAVVAKLMGL EETLDAPGSA RSHRPDRHTR NNYLPHTSRS ICHDLSTLQP KIQPTILKTK PSPRIVPEAA AWKQQKINTA RYYSKEGPSS
401: TSINDNVERL INLTSSECSK DLRALRILSE LHAKRSDYNA RSLNTQKAAA GQTNSAQHFQ SPVVIMKPAR GIVKKNASVA TLAGTKVHRK LRHEESTFTT
501: KTDNSDRTKT HSHNQRAHSR REEDVGSTSS PKPSRILSPR LVRKSDCGRI TQLTVPLMSP AKTSKEVSPR GKLRSRASQS NSICGHDKAM ITESKISLSK
601: QVDTNIINYS NTLNVNTTSI HQSNTTSTSN YEETLILCTD KNIHPLENIP SPVSVLDATF YQDVMSPSLR GISNSFKNVA PLTLHECWNS ISLPDTPTLK
701: KSTESNHIIP ENMKALIQKL ELLQLLSDEA PRTNDNSLIL TANKDRHYIY EILSASGLLH NELKFRIMPC LFQQPSHPIN PELFLILEQA KPTAGKLHRK
801: LIFDLAIEII AKKIYSGSSV RQPLQFIQCK KSSGWHLFKE LCSEIEMLRS EASAIRLSEE EDEESKLAKN AIREMGKWKS FGSELQGIAL GIERSIFKNL
901: IDEVISGEDM GKV
0001: MAAKLLHSLA DDSADLQKQI GCMNGIFQIF DRHHVLTGRR KSLTLGNGNA ININYERDSV DTIYQQKETF QDSNIGGNVK EKRRVSTESS RVSFSSSCSS
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
0101: SPSSSEFNRG VQPDASAYDR ANFQESPTSD PEMTEGNGFS HLGLDLRDVV RDSMYREARG LLSKTPMTRE EVVRQSRRED SPRPYGLKQS TPMDLNESFR
0201: VLARLRETSQ HYNELGMKDA PRYSVDSHDT LKSRQKLKEL PRLSLDSRER ATRNSSVDPK SSKLSESFSE SCSSSSKKRP PSVVAKLMGL ETLPGSPLGR
0301: DIHQFGLNKT NISDQNDDPF SRSLREKNLN RAIRFSPSSP RSLGKDPASP RWRNSDFVMK PLSNTRFPVE PAPWKHADRN RVLQKQASMP VKAKPYEAPN
0401: FPPTVYSEME RRLNDLEFKH SGKDLRALKQ ILESMQSKGF LDTEKQQQST NFAVQRDYER ENSATSNHAM SSRTRVQSSS SNQVYQSPIV IMKPAKLVEK
0501: AGIPASSLIP IHSLTGIKKI RREKPDDKGT SASNSKRVTK DCSPGNRRAE SCTSSFDKKS DSRNVRSSSK KPQQVSKESA SKSSGSVSPR LQQKKLEYDK
0601: RSRPPTPPDS SKSRKPSNQQ LVESTSPGGR RRPKGQKSLQ QVDDQLSQAS NESRTSSHGI CTQSETEASA CVEKSTEADG GKSPSVIEAA KAVVSNLMQN
0701: KSSPRFSEDG LSANLSLVAL EHPSPISVLD ASTYRETEPS PVKTQGNVAH DFGDENCEDQ WNPAYSFSET TSSFSPEINR KKLQNVEHLV QKLRRLNSSH
0801: DEASQDYIAS LCENADPTTD HRYISEILLA SGLLLRDLGS GLTTFQLHPS GHPINPELFF VLEQTKGSST THLLHKEESK VLKNEKLNRK LVFDLVNEIL
0901: VEKLASVEAT TNPLMKSYAK VTKKAVSAQQ LLKELCSAIE TQQKQATKRS ENFLLEEEDD FLKSILAEDV TIRSGNWADF SGEMSGLVLD VERLVFKDLV
1001: NEIVHAETSR LQAKSGRRRT LFADQ
Arabidopsis Description
LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.