Factsheet for Bra021610.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021609.1-P	Field mustard	cytosol	78.09	77.22
Bra021608.1-P	Field mustard	cytosol	53.37	56.21
Bra005410.1-P	Field mustard	cytosol	48.6	48.19
Bra021607.1-P	Field mustard	cytosol	46.35	47.55
Bra021684.1-P	Field mustard	cytosol	46.07	47.13
Bra004072.1-P	Field mustard	cytosol, plastid	48.03	46.85
Bra022778.1-P	Field mustard	cytosol	46.35	46.48
Bra022791.1-P	Field mustard	cytosol	45.22	46.4
Bra032070.1-P	Field mustard	cytosol, peroxisome, plastid	46.07	46.07
Bra022777.1-P	Field mustard	cytosol	45.51	45.89
Bra022790.1-P	Field mustard	plasma membrane	40.17	44.69
Bra022024.1-P	Field mustard	cytosol	19.66	44.03
Bra005142.1-P	Field mustard	cytosol	42.98	43.97
Bra005412.1-P	Field mustard	cytosol	43.54	43.18
Bra033997.1-P	Field mustard	cytosol	28.09	43.1
Bra021683.1-P	Field mustard	mitochondrion	42.7	40.32
Bra000664.1-P	Field mustard	cytosol, nucleus, plastid	40.17	39.5
Bra000669.1-P	Field mustard	cytosol	16.01	39.04
Bra033585.1-P	Field mustard	cytosol, plastid	39.04	38.29
Bra039467.1-P	Field mustard	cytosol	37.92	38.24
Bra004774.1-P	Field mustard	cytosol	37.64	37.85
Bra000668.1-P	Field mustard	cytosol	35.11	37.65
Bra001029.1-P	Field mustard	cytosol	37.08	37.5
Bra000665.1-P	Field mustard	cytosol	38.48	37.33
Bra016843.1-P	Field mustard	cytosol	36.24	37.07
Bra020387.1-P	Field mustard	cytosol	38.2	36.86
Bra005411.1-P	Field mustard	cytosol	49.72	31.78
Bra010511.1-P	Field mustard	cytosol	16.01	30.65

Protein Annotations

EnsemblPlants:Bra021610.1	EnsemblPlants:Bra021610.1-P	EnsemblPlantsGene:Bra021610	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	PFAM:PF00646	PFAM:PF13964	PFscan:PS50181	SMART:SM00256
SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002544425	UniProt:M4DYL4	MapMan:35.1	:

Description

AT4G38940 (E=2e-068) | kelch repeat-containing F-box family protein

Coordinates

chrA04:+:13397495..13398565

Molecular Weight (calculated)

41115.6 Da

IEP (calculated)

7.337

GRAVY (calculated)

-0.117

Length

356 amino acids

Sequence
(BLAST)

001: MSSNVRRKNK QSLITSLPED VIFDILARVP RCEYPTLSLV SKQLRSLVTS PEIYVRRSLL GVTEPCFYVL LYDSQSGDNR WYIIHPKANG NRCLVLIHSL
101: PAMNPVASFV AVDSRIYAFG GRDDHTKYRA LCIDCRFHTV EHLPSMHVPM SHAVVDIIDG KIYVIGDYYH GSNTVMAVFN TETQLWELGM TKPNIDFAGA
201: FPTHCVVMDD KIYVRFIFKS FVYEPKKSQW EMEEMLSSNM WSYACVVDNI LYYYDHWGNK LRTYDPKQRY WGAVKGLDLE ELVPKRNIHW IHTVSYSGKL
301: ALIIAYEGGR TPLYLWSAEI SLEIRQGGEI WGKVEWSDEV LSADNLQVRR FLAVMI

Best Arabidopsis Sequence Match ( AT3G10510.1 )
(BLAST)

001: MLSEDEKEKT PPSVMTSIPD DVIMECIAPR VPRYNHSMLS LVSKQFRSLV ASPRLYKTRS LLGCTEDCVY VLIEDCILEV ARWYSLNRRT KRNMPGTVEN
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L

Arabidopsis Description

Putative F-box/kelch-repeat protein At3g10510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.