Factsheet for Bra022791.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84843	Canola	cytosol	72.33	95.44
CDY24008	Canola	cytosol	31.41	83.85
Bra022790.1-P	Field mustard	plasma membrane	64.27	69.69
Bra005410.1-P	Field mustard	cytosol	49.28	47.63
Bra021684.1-P	Field mustard	cytosol	47.55	47.41
Bra022778.1-P	Field mustard	cytosol	47.84	46.76
Bra000669.1-P	Field mustard	cytosol	19.31	45.89
Bra021610.1-P	Field mustard	cytosol	46.4	45.22
Bra022777.1-P	Field mustard	cytosol	45.82	45.04
Bra021609.1-P	Field mustard	cytosol	46.69	45.0
Bra004072.1-P	Field mustard	cytosol, plastid	47.26	44.93
Bra032070.1-P	Field mustard	cytosol, peroxisome, plastid	45.53	44.38
Bra033997.1-P	Field mustard	cytosol	28.82	43.1
Bra021683.1-P	Field mustard	mitochondrion	45.53	41.91
Bra005412.1-P	Field mustard	cytosol	42.94	41.5
Bra021607.1-P	Field mustard	cytosol	41.5	41.5
Bra000664.1-P	Field mustard	cytosol, nucleus, plastid	43.23	41.44
Bra021608.1-P	Field mustard	cytosol	40.06	41.12
Bra022024.1-P	Field mustard	cytosol	18.73	40.88
Bra000668.1-P	Field mustard	cytosol	38.9	40.66
Bra000665.1-P	Field mustard	cytosol	42.94	40.6
Bra039467.1-P	Field mustard	cytosol	40.92	40.23
Bra005142.1-P	Field mustard	cytosol	39.19	39.08
Bra004774.1-P	Field mustard	cytosol	39.48	38.7
Bra033585.1-P	Field mustard	cytosol, plastid	40.35	38.57
Bra016843.1-P	Field mustard	cytosol	38.62	38.51
Bra001029.1-P	Field mustard	cytosol	38.04	37.5
Bra020387.1-P	Field mustard	cytosol	39.48	37.13
Bra010511.1-P	Field mustard	cytosol	18.16	33.87
Bra005411.1-P	Field mustard	cytosol	46.69	29.08

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra022791	EnsemblPlants:Bra022791.1	EnsemblPlants:Bra022791.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	UniProt:M4E1Z1	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23
SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002540233	:	:

Description

AT4G38940 (E=9e-069) | kelch repeat-containing F-box family protein

Coordinates

chrA03:-:7071125..7072168

Molecular Weight (calculated)

39907.3 Da

IEP (calculated)

7.996

GRAVY (calculated)

-0.175

Length

347 amino acids

Sequence
(BLAST)

001: MSTPLPEDVI IDILARVPRC NYPRLSLVSK HFGSLIASPK LYAVRSLLRC TEHCLYVVLH NRETGGDHRW YILRQKTKDN PRLVLIPSLP VAQLDASYVA
101: MGSKIYVFDK SKTKDDSVTT NVLSIDCRSH TVQHLPSIDV HVYTTLADII NGKIYVLGYQ YRNTNSKKVM VVLNTETQTW EPVMTLPETM AYYTWPSSCV
201: MMDGKMYLRC SNKTFLYDPK ENRWETDEKL DFWINPCVVA DVMYCYYYDG NVLIMYDPKQ RRWGKVRGLE EFLAETKSCS TFSWTGIVGY GGKLALFFPK
301: GVTREIWCAE ISLERQEGEG TWGKVEWCHQ VMVAGNFDVN KCVAVMV

Best Arabidopsis Sequence Match ( AT1G60570.1 )
(BLAST)

001: MSDDEEPPLK KNKLPVEEPT LIPSLPEELI LSILARVSRL SYRSLSLVCK RFHSLLTSGE IYRFRSLSGY TENCLYVCLR FSHTGRSHRW FMLREKNKSS
101: GYVLAPIPIS HSPSLHASSI VAVGSKIYKI GGVMDGSSVS ILDCWSHRWL EAPSMQMERD RPSANLIDGK IYVTGGCHRG SYNPSKWMEV FDLKTETWEP
201: VLCRSDRLTF ESYHERTNNL LVDGKLYIFW ADKGVVYNPK DDTWDSLEVP EMDMCLTLFY CCVIENVLYD FFYEELDIKW YDTKARTWRS LLNGMRELHK
301: FVRHASVTLA DYGGKMVMFW DKFVASGDGL GFHKTMMWCA MIALERSDSG EIWGKVEWFG PVLPNQIPLE YAFEYVGSVK V

Arabidopsis Description

Putative F-box/kelch-repeat protein At1g60570 [Source:UniProtKB/Swiss-Prot;Acc:O22698]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.