Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27759 | Canola | endoplasmic reticulum, vacuole | 93.53 | 35.81 |
| AT3G05545.1 | Thale cress | nucleus | 84.89 | 27.76 |
| Bra001153.1-P | Field mustard | nucleus | 81.3 | 27.23 |
| Bra040540.1-P | Field mustard | nucleus | 71.94 | 23.81 |
| Solyc01g099790.2.1 | Tomato | nucleus | 45.32 | 14.79 |
| VIT_14s0060g02280.t01 | Wine grape | nucleus | 44.6 | 14.66 |
| PGSC0003DMT400063581 | Potato | nucleus | 43.88 | 14.29 |
| KRG96789 | Soybean | nucleus | 41.73 | 13.91 |
| KRH68500 | Soybean | nucleus | 41.01 | 13.67 |
| KRH33887 | Soybean | nucleus | 40.29 | 12.99 |
| KRG92902 | Soybean | nucleus | 39.57 | 12.53 |
| GSMUA_Achr2P02250_001 | Banana | nucleus | 16.55 | 7.74 |
| Bra004436.1-P | Field mustard | nucleus | 19.42 | 7.12 |
| TraesCS1A01G095100.1 | Wheat | cytosol | 19.42 | 6.91 |
| GSMUA_Achr5P27050_001 | Banana | nucleus | 19.42 | 6.49 |
| TraesCS1B01G123100.1 | Wheat | cytosol, nucleus, plasma membrane | 19.42 | 6.22 |
| TraesCS1D01G103800.1 | Wheat | cytosol, nucleus, plasma membrane | 19.42 | 6.22 |
| KXG32474 | Sorghum | nucleus | 20.14 | 6.13 |
| Os05t0154600-01 | Rice | nucleus | 18.7 | 5.96 |
| EES19051 | Sorghum | nucleus | 17.99 | 5.72 |
| Os01t0350900-02 | Rice | cytosol, nucleus, plasma membrane | 18.7 | 5.71 |
| Zm00001d040789_P001 | Maize | nucleus | 18.7 | 5.62 |
| GSMUA_Achr8P06630_001 | Banana | nucleus | 20.86 | 5.44 |
| HORVU1Hr1G022130.3 | Barley | nucleus, plastid | 18.7 | 4.79 |
| Zm00001d009837_P001 | Maize | cytosol, nucleus, plasma membrane | 15.11 | 4.35 |
| Zm00001d037596_P001 | Maize | nucleus | 17.27 | 4.24 |
| Bra013110.1-P | Field mustard | nucleus | 7.91 | 3.72 |
| Bra039430.1-P | Field mustard | cytosol, mitochondrion, nucleus | 0.72 | 0.69 |
Protein Annotations
Description
AT3G05545 (E=3e-043) | transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein
Coordinates
chrA05:-:23302420..23302911
Molecular Weight (calculated)
14978.0 Da
IEP (calculated)
10.375
GRAVY (calculated)
-0.983
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSYHGQTH SSSGRAGSSV APPFPGSNAR TRDRTQALQA YYQQSTAQSH QQPDSPVVSR GPVFPSGRRP SRGSASSSSD QAGGSGFLRF NIWEREPYMP
101: LQQAYPVNQM DREPSIWTSS YNEGAGSFLQ RHGGGGGSS
101: LQQAYPVNQM DREPSIWTSS YNEGAGSFLQ RHGGGGGSS
001: MGLGNKGNKF NFGDNDLADE ASGADGDEGD GFGSVACSIC LETVVKNGDR AWANLQCDHQ FHLDCIGSAF NAKGVMQCPN CRKVEKGQWL YANGCRSYPE
101: FNVEDWVHEE DIYDIGAYSE MSFGVHWCPF GSSARLPSFE DGEFSPSSYH DLLGQQGYYT EPAAPTAGHP CPYVTYFGPV HSPSSSSGGA AGVSDSSSFS
201: SHWNTGSSVS GEVPTPYGFP VDPHYHGWDY HPPPPPPPQH FSASGAHVGS PTQPTPPPAA ARTSRANGSD MIRPRPPHFT RPFHGHSSSG RAGSSVASVP
301: RTPPFPGSNA RTRDRMQALQ AYYQQSSAQS HQPDSPIVSR GPVFPSGRRP ARGIASGMGS TSSSSDQAGG SGFIRFNIWE RDPYMQSQQA YSVNQMDREP
401: NIWTSSFNEG SGSFHQRHGG GGGSS
101: FNVEDWVHEE DIYDIGAYSE MSFGVHWCPF GSSARLPSFE DGEFSPSSYH DLLGQQGYYT EPAAPTAGHP CPYVTYFGPV HSPSSSSGGA AGVSDSSSFS
201: SHWNTGSSVS GEVPTPYGFP VDPHYHGWDY HPPPPPPPQH FSASGAHVGS PTQPTPPPAA ARTSRANGSD MIRPRPPHFT RPFHGHSSSG RAGSSVASVP
301: RTPPFPGSNA RTRDRMQALQ AYYQQSSAQS HQPDSPIVSR GPVFPSGRRP ARGIASGMGS TSSSSDQAGG SGFIRFNIWE RDPYMQSQQA YSVNQMDREP
401: NIWTSSFNEG SGSFHQRHGG GGGSS
Arabidopsis Description
RING finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.