Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82502 | Canola | nucleus | 58.68 | 64.91 |
| CDY33254 | Canola | extracellular | 36.12 | 64.06 |
| CDY39090 | Canola | cytosol | 34.45 | 59.33 |
| AT3G14010.5 | Thale cress | nucleus, plastid | 29.69 | 55.89 |
| CDY26136 | Canola | cytosol | 22.38 | 47.83 |
| CDY08218 | Canola | cytosol | 22.56 | 47.23 |
| CDY33083 | Canola | nucleus | 23.35 | 44.54 |
| CDY51396 | Canola | cytosol | 23.26 | 44.37 |
| KRH23258 | Soybean | cytosol | 21.59 | 38.28 |
| KRH10084 | Soybean | nucleus | 21.06 | 37.23 |
| TraesCS6A01G022300.1 | Wheat | nucleus | 17.36 | 35.69 |
| VIT_09s0002g01560.t01 | Wine grape | nucleus | 19.82 | 35.66 |
| KRH47566 | Soybean | plastid | 19.56 | 35.13 |
| KRH06143 | Soybean | cytosol, plastid | 19.21 | 34.71 |
| Os02t0480900-01 | Rice | nucleus | 17.53 | 33.67 |
| Solyc06g062860.2.1 | Tomato | cytosol | 18.41 | 33.55 |
| Solyc03g121950.2.1 | Tomato | plastid | 18.59 | 33.33 |
| TraesCS6B01G028800.1 | Wheat | nucleus | 17.36 | 33.28 |
| OQU84946 | Sorghum | nucleus | 17.53 | 32.89 |
| TraesCS6D01G024600.2 | Wheat | nucleus | 17.0 | 32.82 |
| GSMUA_Achr6P06300_001 | Banana | mitochondrion | 18.33 | 32.0 |
| GSMUA_Achr7P11380_001 | Banana | mitochondrion | 17.36 | 30.97 |
| HORVU6Hr1G003890.1 | Barley | mitochondrion, plastid | 17.44 | 30.75 |
| Zm00001d016496_P004 | Maize | cytosol, plastid | 17.44 | 30.32 |
| Zm00001d053245_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 16.92 | 30.24 |
| PGSC0003DMT400012530 | Potato | nucleus | 5.37 | 30.2 |
| CDX92787 | Canola | cytosol, nucleus, plastid | 5.11 | 21.64 |
| CDY46672 | Canola | nucleus | 7.05 | 18.14 |
| CDY29262 | Canola | nucleus | 7.4 | 17.99 |
| CDX89288 | Canola | nucleus | 7.22 | 17.6 |
| CDX92788 | Canola | plastid | 2.38 | 16.36 |
Protein Annotations
| EnsemblPlants:CDX75744 | EnsemblPlantsGene:GSBRNA2T00123671001 | Gene3D:1.10.8.10 | Gene3D:2.30.30.100 | InterPro:LsmAD_domain | InterPro:SM_dom_ATX |
| PANTHER:PTHR12854 | PANTHER:PTHR12854:SF7 | PFAM:PF06741 | PFAM:PF14438 | ProteinID:CDX75744 | ProteinID:CDX75744.1 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM01272 | UniParc:UPI0004EF159C | MapMan:35.1 | : |
Description
BnaC03g38270D
Coordinates
chrLK031805:+:311129..319369
Molecular Weight (calculated)
123402.0 Da
IEP (calculated)
5.483
GRAVY (calculated)
-0.666
Length
1135 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGLLALFFLF ITLQSSYSHS APTIVFSKIH GGESFTVTPL RAKLSSVLNP NSPRRKQSSS SLFGAFAYTC AGDLVSDRDR VFEFEQFKAR MSGEDGSLKR
0101: HSRDSLVYLT TCMIGHLVQA HLKNGSVYSG IFHAADVDKD FGIVLKMASL VKDGTFRKPP YKTFIIPADE LVQVVAKDLS VVSDGKLNAV QSEKSVELLT
0201: DSSISKSCRV VQRSERKPRV LDGEAPEGLD NVFDESCKSE EQVLKATPLM VSSQLKVQES TSLVQTVEEK NSPGKESAEA PPSSMSSSQL TYRPEEWKEE
0301: GIKSFFKVAT GASREAAIAC LSNCKWNQDD AISYFFGDYT EAIQDSTSPV KESAEALSSS MSSIVKSFCD VVIVASRKDA EACLSHCKWN QEDAISYFFG
0401: EYTEANPEIA WSQAGESQPF QNETNADQSC SIHGDHAGHL PSEQRSKDFP PQDSSTSESQ LGERRNNNNP EGAHSNRTPE KSVSGSGHGD IKEGGGGTSA
0501: SKTVAENERQ VSQVSGETKS ESAFGQSDSR RISESGPAPP TSTRPGLSPS SSISSLPSPE KSTLNPNAKF EQFKATMSVE DGSLKRHSRD SLVYLTTCMI
0601: GHLVEAHLKN GSIYSGIFHA ADVKKDFGIV LKMASLVKDG TLPGHKSRSQ FVRKPPYKTF IIPADELLQV VAKDLSVFSD GKLKAVQSEK SVELLTDSSI
0701: SKSCRVDQGR ELKPWVPDGE APEGLDNVFD KPWKRGGWDQ FKVNQERFGV KSTFNEEMYT TPLDRGLRTR ELEEKAGEIA REIEGENTGD LHVAEERGLQ
0801: VNDKFDTDEE AKYSAVRRVD GFDDSGFDEE DEKLLDTCND QTFGGSSTSI VQKPTSSSGQ KPTSSSGKGY GGESCSIADD HAGHLPSEQR SKDFPAQGSS
0901: ISERQLGERR NNNNPEVARS NRSPEASVSG HGDIEEGANL GGGGTSSASM TVAEKERQVG QVSGERKSEI SFGQSASRRG SESGPAPSAS TRPGLSSPSS
1001: SISSLPSSEK SILNPNAKEF KPSQSPAPVR PQSPIAGGSF YYAAPTPPVQ QMPVMPAGYG IQPQYPGQQQ LLRYPGHEYP QTYYPPNAPP QYQQWQQLMM
1101: QGQELMMQGQ QPRPPDMIYM PLPAPYQPGN PHNQG
0101: HSRDSLVYLT TCMIGHLVQA HLKNGSVYSG IFHAADVDKD FGIVLKMASL VKDGTFRKPP YKTFIIPADE LVQVVAKDLS VVSDGKLNAV QSEKSVELLT
0201: DSSISKSCRV VQRSERKPRV LDGEAPEGLD NVFDESCKSE EQVLKATPLM VSSQLKVQES TSLVQTVEEK NSPGKESAEA PPSSMSSSQL TYRPEEWKEE
0301: GIKSFFKVAT GASREAAIAC LSNCKWNQDD AISYFFGDYT EAIQDSTSPV KESAEALSSS MSSIVKSFCD VVIVASRKDA EACLSHCKWN QEDAISYFFG
0401: EYTEANPEIA WSQAGESQPF QNETNADQSC SIHGDHAGHL PSEQRSKDFP PQDSSTSESQ LGERRNNNNP EGAHSNRTPE KSVSGSGHGD IKEGGGGTSA
0501: SKTVAENERQ VSQVSGETKS ESAFGQSDSR RISESGPAPP TSTRPGLSPS SSISSLPSPE KSTLNPNAKF EQFKATMSVE DGSLKRHSRD SLVYLTTCMI
0601: GHLVEAHLKN GSIYSGIFHA ADVKKDFGIV LKMASLVKDG TLPGHKSRSQ FVRKPPYKTF IIPADELLQV VAKDLSVFSD GKLKAVQSEK SVELLTDSSI
0701: SKSCRVDQGR ELKPWVPDGE APEGLDNVFD KPWKRGGWDQ FKVNQERFGV KSTFNEEMYT TPLDRGLRTR ELEEKAGEIA REIEGENTGD LHVAEERGLQ
0801: VNDKFDTDEE AKYSAVRRVD GFDDSGFDEE DEKLLDTCND QTFGGSSTSI VQKPTSSSGQ KPTSSSGKGY GGESCSIADD HAGHLPSEQR SKDFPAQGSS
0901: ISERQLGERR NNNNPEVARS NRSPEASVSG HGDIEEGANL GGGGTSSASM TVAEKERQVG QVSGERKSEI SFGQSASRRG SESGPAPSAS TRPGLSSPSS
1001: SISSLPSSEK SILNPNAKEF KPSQSPAPVR PQSPIAGGSF YYAAPTPPVQ QMPVMPAGYG IQPQYPGQQQ LLRYPGHEYP QTYYPPNAPP QYQQWQQLMM
1101: QGQELMMQGQ QPRPPDMIYM PLPAPYQPGN PHNQG
001: MLEQSKAAMS IPQSKSSSNG FPLKRGETEE VLHKTNTSNT VFNGEAGSLK RLSLDRLVYF TTCKIGHHVE VHLRNGSVYT GIFHAANVEK DFGIILKMAC
101: LIKDGTLRGH KSRSEFVRKP PSKTFIIPAD ELVQVIAKDL SVSSNNMSNA VQGEKPSELL TDSSISQSYH VDRERQLQRW VPDETIPHGA DLENVFDNPW
201: NRKWNQFEVN KSLFGVKSTF DEDLYTTRLE RGPQTKQLEE HAQKIAREIE AETTRDIHVA EERGLQLNEN FDFDEEARYS SVRPVTGFGD SGFDLEDNAL
301: LDTCNDLTFG GSSTSDGQKP ASSGKGCEEL RVSGDSQSSR KNKNVDQSCS TSKQQSKDFP AAGSNISESQ LDEQRRKNNE EVSHNNRSAE ESTSGHGDIK
401: EGAKSGGGAS SVSKAVTERE REASQVSSKT KSESSFGQSA SRSSESRPGP STSSRPGLSP SSSIGSMASS EKSTLNPNAK EFKLNPKAKS FKPLQSAAAP
501: PQSPIADASF YYPGPSHVPV QQMPGMPPVN YGLPPYPGNQ PQMMYHPQAY YHPNGQPQYP QQQMIPGQQQ QQMIPGQQHP RPVYYMHPPP YPQDMPYHNK
601: GRE
101: LIKDGTLRGH KSRSEFVRKP PSKTFIIPAD ELVQVIAKDL SVSSNNMSNA VQGEKPSELL TDSSISQSYH VDRERQLQRW VPDETIPHGA DLENVFDNPW
201: NRKWNQFEVN KSLFGVKSTF DEDLYTTRLE RGPQTKQLEE HAQKIAREIE AETTRDIHVA EERGLQLNEN FDFDEEARYS SVRPVTGFGD SGFDLEDNAL
301: LDTCNDLTFG GSSTSDGQKP ASSGKGCEEL RVSGDSQSSR KNKNVDQSCS TSKQQSKDFP AAGSNISESQ LDEQRRKNNE EVSHNNRSAE ESTSGHGDIK
401: EGAKSGGGAS SVSKAVTERE REASQVSSKT KSESSFGQSA SRSSESRPGP STSSRPGLSP SSSIGSMASS EKSTLNPNAK EFKLNPKAKS FKPLQSAAAP
501: PQSPIADASF YYPGPSHVPV QQMPGMPPVN YGLPPYPGNQ PQMMYHPQAY YHPNGQPQYP QQQMIPGQQQ QQMIPGQQHP RPVYYMHPPP YPQDMPYHNK
601: GRE
Arabidopsis Description
CID4CTC-interacting domain 4 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLC0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.