CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22793	Canola	cytosol	95.62	95.62
AT1G50400.1	Thale cress	cytosol	61.25	63.23
VIT_03s0097g00590.t01	Wine grape	cytosol	55.94	57.93
Solyc06g082800.2.1	Tomato	cytosol, nucleus, peroxisome	55.94	57.37
CDX82267	Canola	cytosol	54.69	56.63
CDY36066	Canola	cytosol	54.38	56.31
CDY33440	Canola	cytosol	54.06	55.81
CDY42223	Canola	cytosol	54.06	55.81
Solyc06g007710.2.1	Tomato	plastid	54.38	55.41
CDY24571	Canola	cytosol	53.12	55.02
CDY25368	Canola	cytosol	53.12	55.02
PGSC0003DMT400051986	Potato	cytosol, plastid	12.5	54.79
KRH60449	Soybean	mitochondrion	51.88	53.9
KRH41747	Soybean	mitochondrion	51.56	53.23
EER94935	Sorghum	cytosol, plastid	52.5	50.45
Zm00001d028971_P001	Maize	cytosol	52.5	50.3
HORVU4Hr1G051720.1	Barley	cytosol	52.5	50.0
TraesCS4A01G129200.1	Wheat	plastid	52.5	50.0
Zm00001d047566_P008	Maize	cytosol	51.88	49.85
GSMUA_Achr8P01650_001	Banana	plastid	50.31	49.85
TraesCS4D01G177200.1	Wheat	cytosol, mitochondrion, unclear	52.19	49.7
TraesCS4B01G175300.1	Wheat	cytosol	52.19	49.7
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome, plastid	51.25	49.1
Os03t0323800-01	Rice	cytosol, mitochondrion	51.25	48.66
GSMUA_Achr10P...	Banana	extracellular, vacuole	27.5	46.81
KXG32258	Sorghum	plastid	48.75	46.29
Zm00001d008242_P001	Maize	mitochondrion	48.44	45.86
TraesCS3D01G192000.1	Wheat	cytosol, nucleus, peroxisome	47.5	45.51
TraesCS3A01G188600.1	Wheat	cytosol	47.5	45.37
TraesCS3B01G217800.1	Wheat	cytosol, nucleus, peroxisome	46.88	44.91
GSMUA_Achr2P11550_001	Banana	cytosol, extracellular, plastid, vacuole	48.12	43.87
HORVU3Hr1G039040.6	Barley	mitochondrion	47.5	41.76
GSMUA_Achr10P...	Banana	plastid	27.19	40.65
Zm00001d040440_P001	Maize	plastid	22.5	39.34
Os01t0276200-00	Rice	mitochondrion	44.38	34.3

Protein Annotations

Gene3D:2.40.160.10	MapMan:23.2.1.6	GO:A0A078HHG3	UniProt:A0A078HHG3	EnsemblPlants:CDY37141	ProteinID:CDY37141
ProteinID:CDY37141.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0008320
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030150	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00063381001
InterPro:IPR023614	PFAM:PF01459	PANTHER:PTHR10802	PANTHER:PTHR10802:SF2	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf
InterPro:Tom40	UniParc:UPI0004EE982D	:	:	:	:

Description

BnaC06g03580DBnaC06g03580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHG3]

Coordinates

chrLK032392:-:309049..311211

Molecular Weight (calculated)

36108.2 Da

IEP (calculated)

8.408

GRAVY (calculated)

-0.320

Length

320 amino acids

Sequence
(BLAST)

001: MAGFAPPNVT AQFHSKTKIE EKVDYSNLPC PKPYEDIHLE ATKSLKPEHF EGFRLDYTKR MNHKFSLIHS LLMGNSELPA ERSQHIFKTP TSSYEFGANF
101: IDPKLMLDGR LMMDGTVIAR FNSVLKENFT IKTTAHLTNE LDKSQGVFTV DYKGSDYRTQ FQLGNYRNQF EPGTSSLFRA NYIQHVTPKL SLGGEVLYLS
201: EHRKSVVGYV ARYETDKMVA SGQVASSGVA IMNYVHKVTD KISLAADFFY SFMLRDGAAS VGYDLMFRQS RVRGKIDSNG VVFAHVEEQL CPGLGLLLCA
301: EVDHVKKDYK FGLGVKYESL

Best Arabidopsis Sequence Match ( AT1G50400.1 )
(BLAST)

001: MEGFSPPINT AQVDAKTKLD EKVDYSNLPC PVLYEELNRE ATMALKPELF EGFRLDYNKS LNQKFFLSHS ILMGPTEVPN PTPSSEIIKI PTANYDFGAG
101: FIDPKLYLIG RITTDGRLNA RAKFDLTDNF SVKANALLTD EEDKSQGHLV IDYKGSDYRT QLQLGNNSVY AANYIQHVTP HLSLGGEAFW LGQQLMSGVG
201: YAARYETDKT VASGQIASTG VAVMNYVHKV SEKLSFATDF IYNYLSRDVT ASVGYDLITR QSRLRGKVDS NGVVAAYLEE QLPIGLRFLL SAEVDHVKKD
301: YKFGFGVNAF

Arabidopsis Description

TOM40-2Probable mitochondrial import receptor subunit TOM40-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.