Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018846.1-P | Field mustard | cytosol | 99.06 | 99.06 |
| CDY37141 | Canola | cytosol | 95.62 | 95.62 |
| AT1G50400.1 | Thale cress | cytosol | 59.38 | 61.29 |
| VIT_03s0097g00590.t01 | Wine grape | cytosol | 54.69 | 56.63 |
| Solyc06g082800.2.1 | Tomato | cytosol, nucleus, peroxisome | 54.69 | 56.09 |
| CDX82267 | Canola | cytosol | 53.44 | 55.34 |
| CDY36066 | Canola | cytosol | 53.12 | 55.02 |
| CDY33440 | Canola | cytosol | 52.81 | 54.52 |
| CDY42223 | Canola | cytosol | 52.81 | 54.52 |
| CDY25368 | Canola | cytosol | 52.5 | 54.37 |
| Solyc06g007710.2.1 | Tomato | plastid | 53.12 | 54.14 |
| CDY24571 | Canola | cytosol | 52.19 | 54.05 |
| PGSC0003DMT400051986 | Potato | cytosol, plastid | 12.19 | 53.42 |
| KRH60449 | Soybean | mitochondrion | 51.25 | 53.25 |
| KRH41747 | Soybean | mitochondrion | 50.94 | 52.58 |
| EER94935 | Sorghum | cytosol, plastid | 51.25 | 49.25 |
| Zm00001d028971_P001 | Maize | cytosol | 51.25 | 49.1 |
| HORVU4Hr1G051720.1 | Barley | cytosol | 51.25 | 48.81 |
| TraesCS4A01G129200.1 | Wheat | plastid | 51.25 | 48.81 |
| Zm00001d047566_P008 | Maize | cytosol | 50.62 | 48.65 |
| GSMUA_Achr8P01650_001 | Banana | plastid | 49.06 | 48.61 |
| TraesCS4D01G177200.1 | Wheat | cytosol, mitochondrion, unclear | 50.94 | 48.51 |
| TraesCS4B01G175300.1 | Wheat | cytosol | 50.94 | 48.51 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome, plastid | 50.62 | 48.5 |
| Os03t0323800-01 | Rice | cytosol, mitochondrion | 50.0 | 47.48 |
| GSMUA_Achr10P... | Banana | extracellular, vacuole | 26.56 | 45.21 |
| KXG32258 | Sorghum | plastid | 47.5 | 45.1 |
| Zm00001d008242_P001 | Maize | mitochondrion | 47.19 | 44.67 |
| TraesCS3D01G192000.1 | Wheat | cytosol, nucleus, peroxisome | 46.25 | 44.31 |
| TraesCS3A01G188600.1 | Wheat | cytosol | 46.25 | 44.18 |
| TraesCS3B01G217800.1 | Wheat | cytosol, nucleus, peroxisome | 45.62 | 43.71 |
| GSMUA_Achr2P11550_001 | Banana | cytosol, extracellular, plastid, vacuole | 46.88 | 42.73 |
| HORVU3Hr1G039040.6 | Barley | mitochondrion | 46.56 | 40.93 |
| GSMUA_Achr10P... | Banana | plastid | 26.25 | 39.25 |
| Zm00001d040440_P001 | Maize | plastid | 21.88 | 38.25 |
| Os01t0276200-00 | Rice | mitochondrion | 43.44 | 33.57 |
Protein Annotations
| Gene3D:2.40.160.10 | MapMan:23.2.1.6 | GO:A0A078GDS0 | UniProt:A0A078GDS0 | EnsemblPlants:CDY22793 | ProteinID:CDY22793 |
| ProteinID:CDY22793.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008320 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030150 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00021135001 |
| InterPro:IPR023614 | PFAM:PF01459 | PANTHER:PTHR10802 | PANTHER:PTHR10802:SF2 | InterPro:Porin_Euk/Tom40 | InterPro:Porin_dom_sf |
| InterPro:Tom40 | UniParc:UPI0004EEE080 | : | : | : | : |
Description
BnaA06g02840DBnaA06g02840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDS0]
Coordinates
chrLK032136:+:101281..103482
Molecular Weight (calculated)
35933.0 Da
IEP (calculated)
8.083
GRAVY (calculated)
-0.250
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGFASPNVT AQFHSKTKIE EKVDYSNLPC PKPYEDIHLE ATISLKPELF EGFRLNYTKR MNHKFSLIHS LLMGNSELSA ERSQHIFKTP TSSYEFGANL
101: IDPKLMLDGR LMMDGTVIAR FNSVLKENFT IKTTAQLTNE LDQSQGVFTV DYKGSDYRTQ FQLGNYKNQF KPGTSSLFRA NYIQHVTPKL SLGGEVLYLS
201: EHRKSVVGYV ARYETDKMVA SGQVASSGVA IMNYVHKVTD KISLAAEFFY SFMLRDGAAS VGYDLMFRQS RVRGKIDSNG VVFAHVEEQL CPGLGLLLCA
301: EVDHVKTDYK FGLGVQYEGL
101: IDPKLMLDGR LMMDGTVIAR FNSVLKENFT IKTTAQLTNE LDQSQGVFTV DYKGSDYRTQ FQLGNYKNQF KPGTSSLFRA NYIQHVTPKL SLGGEVLYLS
201: EHRKSVVGYV ARYETDKMVA SGQVASSGVA IMNYVHKVTD KISLAAEFFY SFMLRDGAAS VGYDLMFRQS RVRGKIDSNG VVFAHVEEQL CPGLGLLLCA
301: EVDHVKTDYK FGLGVQYEGL
001: MEGFSPPINT AQVDAKTKLD EKVDYSNLPC PVLYEELNRE ATMALKPELF EGFRLDYNKS LNQKFFLSHS ILMGPTEVPN PTPSSEIIKI PTANYDFGAG
101: FIDPKLYLIG RITTDGRLNA RAKFDLTDNF SVKANALLTD EEDKSQGHLV IDYKGSDYRT QLQLGNNSVY AANYIQHVTP HLSLGGEAFW LGQQLMSGVG
201: YAARYETDKT VASGQIASTG VAVMNYVHKV SEKLSFATDF IYNYLSRDVT ASVGYDLITR QSRLRGKVDS NGVVAAYLEE QLPIGLRFLL SAEVDHVKKD
301: YKFGFGVNAF
101: FIDPKLYLIG RITTDGRLNA RAKFDLTDNF SVKANALLTD EEDKSQGHLV IDYKGSDYRT QLQLGNNSVY AANYIQHVTP HLSLGGEAFW LGQQLMSGVG
201: YAARYETDKT VASGQIASTG VAVMNYVHKV SEKLSFATDF IYNYLSRDVT ASVGYDLITR QSRLRGKVDS NGVVAAYLEE QLPIGLRFLL SAEVDHVKKD
301: YKFGFGVNAF
Arabidopsis Description
TOM40-2Probable mitochondrial import receptor subunit TOM40-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX55]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.