Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g095900.1.1 | Tomato | nucleus | 89.85 | 89.47 |
| PGSC0003DMT400035914 | Potato | nucleus | 43.39 | 47.56 |
| PGSC0003DMT400065601 | Potato | nucleus | 42.0 | 47.41 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 41.72 | 41.38 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 20.45 | 39.52 |
| KRH61488 | Soybean | nucleus | 39.08 | 39.36 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 20.86 | 37.22 |
| CDY66493 | Canola | nucleus | 27.82 | 36.17 |
| Bra007774.1-P | Field mustard | nucleus | 29.07 | 35.3 |
| KRH05522 | Soybean | nucleus | 34.63 | 34.92 |
| CDY11505 | Canola | nucleus | 28.65 | 34.8 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 19.61 | 34.56 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 25.45 | 34.4 |
| CDX76735 | Canola | nucleus | 27.96 | 34.3 |
| AT2G25930.1 | Thale cress | nucleus | 32.68 | 33.81 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 12.66 | 33.58 |
| CDY35321 | Canola | nucleus | 27.82 | 33.39 |
| Bra034284.1-P | Field mustard | nucleus | 27.54 | 32.89 |
| KRH15494 | Soybean | nucleus | 18.08 | 31.1 |
| Zm00001d039156_P001 | Maize | nucleus | 26.43 | 29.37 |
| OQU78543 | Sorghum | nucleus | 29.62 | 28.59 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 28.65 | 26.93 |
| Os06t0142600-01 | Rice | nucleus | 28.37 | 26.84 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 28.65 | 26.65 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 28.37 | 26.53 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 27.96 | 26.21 |
| Zm00001d044232_P001 | Maize | nucleus | 27.4 | 25.89 |
| EES03137 | Sorghum | nucleus | 27.12 | 24.94 |
| PGSC0003DMT400012338 | Potato | nucleus | 20.86 | 22.97 |
| Os01t0566100-01 | Rice | nucleus | 11.13 | 20.2 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 21.98 | 19.36 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400075345 | EnsemblPlantsGene:PGSC0003DMG400029303 | EntrezGene:102597046 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009791 | GO:GO:2000028 | PGSC:PGSC0003DMG400029303 | RefSeq:XP_006342510.1 | SEG:seg |
| UniParc:UPI0002949344 | UniProt:M1CV04 | MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : |
Description
Early flowering 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400029303]
Coordinates
chr12:-:57721725..57728451
Molecular Weight (calculated)
78593.9 Da
IEP (calculated)
9.000
GRAVY (calculated)
-0.729
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGKGEEKL MGPMFPRLHV NDTEKGGPRA PPRNKMALYE QLSIPSQRFK HGISNNPNNA NIQGNGREND DFFSVQLPPS RHPTENPHSC SSNSKTPLLP
101: VESNKKTEED DFSVPVFVKS KAGQGDGKLY STLDGRKLSA STAVLSGHSR KDLNDENSKQ IAVGRKISCN STSIPSMDKL DDVLKKADVQ LQYEPRDDPD
201: NTFGIFCKND LLRPECRVDS QVGGTMLSEP VRVVDNGDSS LLVKDVASKE QISPNNNHSN DKESKEDKAS ESLQTKIVDQ GDDLSETSMV ESISGMYISP
301: DDVVGIIGQK HFWNARRAIA NQQRAFAVQV FELHRLIKVQ RLIASSQSML EDSAYLSKAV KDSSAKKLPL EYIVRDGHNV SKQRKNFEKP NTRMECSAEN
401: TVGKPVKDSS AKRLPLEYIV RDGHNVSKQR KDFEKPNFSM ECSAENTVGK ASFSSVQNNS QPSSYSLFPG HLITNDSTMG PWSFNQPSGH QWLIPVMTPS
501: EGLVYKPYPG PGVTSSICGG YGPPGSTPII GNHAAPSYGI PASHHQYQGV RMPFAPPAGH NYFPSYGMPA INPAISSSPV DQSSQFVAQG LQGQLSGGGA
601: NFSVQRQNSS NMPSNKNGTD VKSHSYRDAE MQASTASSPS GTANKIIVDN ATERRNVLPL FPTSPATKNP DISSQPQVPS HHARVIKVVP RNARSATESA
701: ARIFQSIQEE RKQYDSGVN
101: VESNKKTEED DFSVPVFVKS KAGQGDGKLY STLDGRKLSA STAVLSGHSR KDLNDENSKQ IAVGRKISCN STSIPSMDKL DDVLKKADVQ LQYEPRDDPD
201: NTFGIFCKND LLRPECRVDS QVGGTMLSEP VRVVDNGDSS LLVKDVASKE QISPNNNHSN DKESKEDKAS ESLQTKIVDQ GDDLSETSMV ESISGMYISP
301: DDVVGIIGQK HFWNARRAIA NQQRAFAVQV FELHRLIKVQ RLIASSQSML EDSAYLSKAV KDSSAKKLPL EYIVRDGHNV SKQRKNFEKP NTRMECSAEN
401: TVGKPVKDSS AKRLPLEYIV RDGHNVSKQR KDFEKPNFSM ECSAENTVGK ASFSSVQNNS QPSSYSLFPG HLITNDSTMG PWSFNQPSGH QWLIPVMTPS
501: EGLVYKPYPG PGVTSSICGG YGPPGSTPII GNHAAPSYGI PASHHQYQGV RMPFAPPAGH NYFPSYGMPA INPAISSSPV DQSSQFVAQG LQGQLSGGGA
601: NFSVQRQNSS NMPSNKNGTD VKSHSYRDAE MQASTASSPS GTANKIIVDN ATERRNVLPL FPTSPATKNP DISSQPQVPS HHARVIKVVP RNARSATESA
701: ARIFQSIQEE RKQYDSGVN
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.