Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G477400.1 | Wheat | nucleus | 91.2 | 91.68 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 90.56 | 91.26 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 84.61 | 85.49 |
| OQU78543 | Sorghum | nucleus | 58.34 | 60.54 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 20.83 | 59.41 |
| Zm00001d039156_P001 | Maize | nucleus | 45.8 | 54.71 |
| Os06t0142600-01 | Rice | nucleus | 47.61 | 48.42 |
| Os01t0566100-01 | Rice | nucleus | 21.35 | 41.67 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 21.6 | 41.44 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 19.79 | 41.13 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 20.96 | 39.71 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 27.04 | 39.29 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 31.82 | 33.93 |
| PGSC0003DMT400035914 | Potato | nucleus | 27.94 | 32.93 |
| Solyc08g065870.2.1 | Tomato | nucleus | 27.17 | 32.61 |
| Solyc11g070100.1.1 | Tomato | nucleus | 25.23 | 32.34 |
| PGSC0003DMT400065601 | Potato | nucleus | 26.39 | 32.03 |
| CDY66493 | Canola | nucleus | 22.51 | 31.46 |
| KRH61488 | Soybean | nucleus | 28.46 | 30.81 |
| CDY11505 | Canola | nucleus | 23.16 | 30.24 |
| Bra007774.1-P | Field mustard | nucleus | 23.16 | 30.24 |
| CDX76735 | Canola | nucleus | 22.9 | 30.2 |
| Bra034284.1-P | Field mustard | nucleus | 23.29 | 29.9 |
| KRH47177 | Soybean | nucleus | 26.13 | 29.75 |
| KRH05522 | Soybean | nucleus | 27.43 | 29.73 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 28.46 | 29.73 |
| CDY35321 | Canola | nucleus | 22.77 | 29.38 |
| PGSC0003DMT400075345 | Potato | nucleus | 26.65 | 28.65 |
| Solyc12g095900.1.1 | Tomato | nucleus | 26.52 | 28.39 |
| KRH44225 | Soybean | nucleus | 24.97 | 27.3 |
| PGSC0003DMT400012338 | Potato | nucleus | 22.9 | 27.11 |
| KRH15494 | Soybean | nucleus | 14.62 | 27.03 |
| CDY32422 | Canola | nucleus, plastid | 16.95 | 26.68 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 20.7 | 26.58 |
| Bra001825.1-P | Field mustard | nucleus | 17.46 | 25.86 |
| CDY56915 | Canola | nucleus | 17.85 | 25.65 |
| CDY48882 | Canola | nucleus | 16.04 | 25.31 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 26.65 | 25.25 |
| AT2G25930.1 | Thale cress | nucleus | 22.64 | 25.18 |
| CDY62750 | Canola | nucleus | 15.65 | 24.74 |
| Bra023887.1-P | Field mustard | nucleus | 16.56 | 24.71 |
| CDY51450 | Canola | nucleus | 17.08 | 24.63 |
| Bra031274.1-P | Field mustard | nucleus | 17.08 | 24.63 |
| AT3G21320.1 | Thale cress | nucleus | 16.95 | 24.26 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G443200.2 | EnsemblPlantsGene:TraesCS1A01G443200 | PANTHER:PTHR34281 | PANTHER:PTHR34281:SF5 | SEG:seg | MapMan:15.5.27 |
| MapMan:27.1.6.3.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:591611693..591615395
Molecular Weight (calculated)
82709.8 Da
IEP (calculated)
9.451
GRAVY (calculated)
-0.741
Length
773 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRAGGKDGG EDKVMGPLFP RLHVNDTTLK GGGPRAPPRN KMALYEQFSV PSQRFAANAA NTAPAAAHRP AASYAAVSSA SAGQIGGIDR PLFPSFCVPS
101: NEPVRLPEHI KTNSSGRDGH ATSGRLSTLL KSKDAYAAGS TAECSSSQRR DNNSNNNNNT KNSSGKKLTH DDDFTVPSVF CSGVRPRSNH EEVRIQENST
201: PFPATSPYKS GPTLSKPTAK FPNTDKRYLE GRNASDTRSM DSPSIIRDKA PANTTTNFLE AEERTSSFQF PAEKTMGKRD DKGSSYSRVK ETSSINVSDK
301: QHSRNEGHQA RTRNENAAES QNAPKAGNGP YSTDIACNGA SKLSEKGLRE TGEKRKRSTG HHDVQRDDSS DSSVESLPDL EISPDDVVGA IGPKHFWKAR
401: RAIVNQQRVF AVQVFELHRL IKQVQKLIAA SPHLLIEWDP CLGSALVTSK KKTAAANVEK QLLSAKSKDD DDAQLTLQQA EYSKDNTEGN QASPSQDNDV
501: VEVRHENQAA SNGAVSSNPP AMPAPPDNKQ NNWCAPPPQN QWLVPVMSPS EGFVYKPYTG PCPPAGSILA PFYASCAPLS LPSTAGEFMN SPYGIPMPHQ
601: PQHMGVGGPP AMPPMYFPPF SVPVMNPVVS SSAVEQVSRV AAARPNTHVE HHSRSSCNMR NEAVSAGGVW RFHSSRGSEL QGSSAASSPF DRQQGQGEAR
701: GPAAAAPAAP LPTSSAGNGN AAQQPQVSSG SQENPVAAAA RVIRVVPHTA RTASESAARI FRSIQMERQQ NGP
101: NEPVRLPEHI KTNSSGRDGH ATSGRLSTLL KSKDAYAAGS TAECSSSQRR DNNSNNNNNT KNSSGKKLTH DDDFTVPSVF CSGVRPRSNH EEVRIQENST
201: PFPATSPYKS GPTLSKPTAK FPNTDKRYLE GRNASDTRSM DSPSIIRDKA PANTTTNFLE AEERTSSFQF PAEKTMGKRD DKGSSYSRVK ETSSINVSDK
301: QHSRNEGHQA RTRNENAAES QNAPKAGNGP YSTDIACNGA SKLSEKGLRE TGEKRKRSTG HHDVQRDDSS DSSVESLPDL EISPDDVVGA IGPKHFWKAR
401: RAIVNQQRVF AVQVFELHRL IKQVQKLIAA SPHLLIEWDP CLGSALVTSK KKTAAANVEK QLLSAKSKDD DDAQLTLQQA EYSKDNTEGN QASPSQDNDV
501: VEVRHENQAA SNGAVSSNPP AMPAPPDNKQ NNWCAPPPQN QWLVPVMSPS EGFVYKPYTG PCPPAGSILA PFYASCAPLS LPSTAGEFMN SPYGIPMPHQ
601: PQHMGVGGPP AMPPMYFPPF SVPVMNPVVS SSAVEQVSRV AAARPNTHVE HHSRSSCNMR NEAVSAGGVW RFHSSRGSEL QGSSAASSPF DRQQGQGEAR
701: GPAAAAPAAP LPTSSAGNGN AAQQPQVSSG SQENPVAAAA RVIRVVPHTA RTASESAARI FRSIQMERQQ NGP
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.