Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G477400.1 | Wheat | nucleus | 96.61 | 96.36 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 91.26 | 90.56 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 86.83 | 87.06 |
| OQU78543 | Sorghum | nucleus | 57.89 | 59.6 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 20.73 | 58.67 |
| Zm00001d039156_P001 | Maize | nucleus | 45.63 | 54.1 |
| Os06t0142600-01 | Rice | nucleus | 48.11 | 48.55 |
| Os01t0566100-01 | Rice | nucleus | 22.16 | 42.93 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 21.51 | 40.94 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 19.82 | 40.86 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 21.12 | 39.71 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 27.25 | 39.29 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 31.03 | 32.83 |
| PGSC0003DMT400035914 | Potato | nucleus | 27.64 | 32.32 |
| Solyc11g070100.1.1 | Tomato | nucleus | 25.03 | 31.84 |
| Solyc08g065870.2.1 | Tomato | nucleus | 26.73 | 31.83 |
| PGSC0003DMT400065601 | Potato | nucleus | 26.08 | 31.4 |
| CDY66493 | Canola | nucleus | 22.29 | 30.92 |
| KRH61488 | Soybean | nucleus | 28.29 | 30.39 |
| CDY11505 | Canola | nucleus | 23.34 | 30.24 |
| Bra007774.1-P | Field mustard | nucleus | 23.34 | 30.24 |
| CDX76735 | Canola | nucleus | 23.08 | 30.2 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 28.68 | 29.73 |
| Bra034284.1-P | Field mustard | nucleus | 23.21 | 29.57 |
| KRH05522 | Soybean | nucleus | 27.25 | 29.31 |
| CDY35321 | Canola | nucleus | 22.69 | 29.05 |
| KRH47177 | Soybean | nucleus | 25.55 | 28.87 |
| PGSC0003DMT400075345 | Potato | nucleus | 26.21 | 27.96 |
| Solyc12g095900.1.1 | Tomato | nucleus | 26.21 | 27.84 |
| KRH15494 | Soybean | nucleus | 14.73 | 27.03 |
| KRH44225 | Soybean | nucleus | 24.64 | 26.73 |
| CDY32422 | Canola | nucleus, plastid | 17.08 | 26.68 |
| PGSC0003DMT400012338 | Potato | nucleus | 22.16 | 26.03 |
| Bra001825.1-P | Field mustard | nucleus | 17.6 | 25.86 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 20.21 | 25.75 |
| CDY56915 | Canola | nucleus | 17.99 | 25.65 |
| CDY48882 | Canola | nucleus | 16.17 | 25.31 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 26.86 | 25.25 |
| AT2G25930.1 | Thale cress | nucleus | 22.56 | 24.89 |
| CDY51450 | Canola | nucleus | 17.21 | 24.63 |
| Bra031274.1-P | Field mustard | nucleus | 17.21 | 24.63 |
| CDY62750 | Canola | nucleus | 15.65 | 24.54 |
| Bra023887.1-P | Field mustard | nucleus | 16.56 | 24.52 |
| AT3G21320.1 | Thale cress | nucleus | 17.08 | 24.26 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G451200.2 | EnsemblPlantsGene:TraesCS1D01G451200 | PANTHER:PTHR34281 | PANTHER:PTHR34281:SF5 | SEG:seg | MapMan:15.5.27 |
| MapMan:27.1.6.3.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:493484553..493488588
Molecular Weight (calculated)
81889.8 Da
IEP (calculated)
9.259
GRAVY (calculated)
-0.746
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKSGGGGED KVMGPLFPRL HVNDTTLKGG GPRAPPRNKM ALYEQFSVPS QRFAANTAPA AAHRPAASYA AVSSASAGQI GGIDRPLFPS FCVPSNEPVR
101: LPEHIKTNSS GRDGHATSGR LSTQLKSKDA YAAGSTAECS SSQRRDNNSN NNNTKNSSGK KLTNDDDFTV PSVFCSGVRP RSNHEEVRIQ ENSTPFPATS
201: PYKSGPTVSK PTAKFPNTDK RYLEGRNASD TRAMDSPSII RDKAPANTTT NFLEAEERTS SFQFSAEKTM GKRDDKGSSY SRVKETSSIN VSDKQHSRNE
301: GHQARTRNEN AAESQNAPKA GNGPYSTDVA CNGASNLSEK GLRETGEKRK RSTGHHDAQR DDSSDSSVES LPDLEISPDD VVGAIGPKHF WKARRAIVNQ
401: QRVFAVQVFE LHRLIKQVQK LIAASPHLLI EGDPCLGSAL VTSKKKTAAA NVEKQLLSAK SKDDDDAQLT LQQAEYSKDN TEGNQASRSQ DNDVVEVRHE
501: NQAASNGAVS SNPPAMPAPP DNKQNNWCAP PPQNQWLVPV MSPSEGFVYK PYTGPCPPAG SILAPFYASC APLSLPSTAG EFMNSPYGIP MPHQPHHMGV
601: GGPPAMPPMY FPPFSVPVMN PVVSSSAVEQ VSRVAAARPN THIEHHSRSS CDMRNEAVSA GGVWRFHSSR GSELQGSSAA SSPCDRQQGQ GEARGPAAAA
701: PAAPLPTSSA GNGNAAQQPQ VSSGSQENPV AAAARVIRVV PHTARTASES AARIFRSIQM ERQQNGP
101: LPEHIKTNSS GRDGHATSGR LSTQLKSKDA YAAGSTAECS SSQRRDNNSN NNNTKNSSGK KLTNDDDFTV PSVFCSGVRP RSNHEEVRIQ ENSTPFPATS
201: PYKSGPTVSK PTAKFPNTDK RYLEGRNASD TRAMDSPSII RDKAPANTTT NFLEAEERTS SFQFSAEKTM GKRDDKGSSY SRVKETSSIN VSDKQHSRNE
301: GHQARTRNEN AAESQNAPKA GNGPYSTDVA CNGASNLSEK GLRETGEKRK RSTGHHDAQR DDSSDSSVES LPDLEISPDD VVGAIGPKHF WKARRAIVNQ
401: QRVFAVQVFE LHRLIKQVQK LIAASPHLLI EGDPCLGSAL VTSKKKTAAA NVEKQLLSAK SKDDDDAQLT LQQAEYSKDN TEGNQASRSQ DNDVVEVRHE
501: NQAASNGAVS SNPPAMPAPP DNKQNNWCAP PPQNQWLVPV MSPSEGFVYK PYTGPCPPAG SILAPFYASC APLSLPSTAG EFMNSPYGIP MPHQPHHMGV
601: GGPPAMPPMY FPPFSVPVMN PVVSSSAVEQ VSRVAAARPN THIEHHSRSS CDMRNEAVSA GGVWRFHSSR GSELQGSSAA SSPCDRQQGQ GEARGPAAAA
701: PAAPLPTSSA GNGNAAQQPQ VSSGSQENPV AAAARVIRVV PHTARTASES AARIFRSIQM ERQQNGP
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.