CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47177	Soybean	nucleus	80.76	84.09
GSMUA_Achr6P33500_001	Banana	mitochondrion	17.82	33.87
Os01t0566050-00	Rice	cytosol, nucleus	12.87	33.58
GSMUA_Achr1P05150_001	Banana	nucleus	18.67	32.75
GSMUA_Achr2P08490_001	Banana	nucleus	18.67	32.35
GSMUA_Achr1P14390_001	Banana	nucleus	21.36	28.38
CDY32422	Canola	nucleus, plastid	19.38	27.9
CDY48882	Canola	nucleus	19.09	27.55
Zm00001d039156_P001	Maize	nucleus	25.18	27.51
Bra023887.1-P	Field mustard	nucleus	20.08	27.41
CDY62750	Canola	nucleus	18.81	27.2
CDY56915	Canola	nucleus	20.65	27.14
Bra031274.1-P	Field mustard	nucleus	20.51	27.05
CDY51450	Canola	nucleus	20.51	27.05
VIT_09s0002g02680.t01	Wine grape	nucleus	28.15	26.89
OQU78543	Sorghum	nucleus	28.15	26.71
KRH61488	Soybean	nucleus	26.87	26.61
AT3G21320.1	Thale cress	nucleus	20.23	26.48
Bra001825.1-P	Field mustard	nucleus	19.24	26.05
Os06t0142600-01	Rice	nucleus	27.58	25.66
Solyc06g062480.2.1	Tomato	plasma membrane	21.64	25.42
TraesCS1A01G443200.2	Wheat	nucleus	27.3	24.97
HORVU1Hr1G094980.4	Barley	nucleus	26.87	24.84
TraesCS1B01G477400.1	Wheat	nucleus	26.87	24.71
TraesCS1D01G451200.2	Wheat	nucleus	26.73	24.64
KRH05522	Soybean	nucleus	24.47	24.26
Zm00001d044232_P001	Maize	nucleus	26.03	24.18
EES03137	Sorghum	nucleus	26.45	23.91
PGSC0003DMT400012338	Potato	nucleus	21.64	23.43
KRH15494	Soybean	nucleus	13.44	22.73
Os01t0566100-01	Rice	nucleus	12.31	21.97
GSMUA_Achr5P09620_001	Banana	unclear	21.64	18.75

Protein Annotations

EMBL:ACUP02004913	EnsemblPlants:KRH44225	EnsemblPlantsGene:GLYMA_08G197500	EntrezGene:100820110	GO:GO:0000003	GO:GO:0007275
GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:2000028	PANTHER:PTHR34281	PANTHER:PTHR34281:SF2
ProteinID:KRH44224.1	ProteinID:KRH44225	ProteinID:KRH44225.1	SEG:seg	UniParc:UPI00023C5B9A	UniProt:K7L7Q5
MapMan:15.5.27	MapMan:27.1.6.3.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:15925182..15930250

Molecular Weight (calculated)

78086.1 Da

IEP (calculated)

9.220

GRAVY (calculated)

-0.698

Length

707 amino acids

Sequence
(BLAST)

001: MMNRTRGGIE EGKEISPMFP RLHVKDAEKR GPKAPPRNKM ALYEQFSIPS QNFAPGSTSL FPLPLRNYTG PTSSSHISSN QSIQFCTSSM PSILAEKSQA
101: YNSRKTNLTK FTQDDFINSK NSLKALDGED AFISSGSAHR KNSYCSIIQN NKDEGKLSCS NLSCSHKRLN SIRKVNSPGA VDLMSEQYEK NQIEEHTEVS
201: QIGQKPEEVL PHSLDGFGDM TDASLISLEK GKNSKSMNKE HRSLKEENRS ISVDSLKTLQ GSSVRTQEEL AAFRDQIKSR DHHIEKPAAS ELHKCSGELE
301: IGRRCFLDKV NRNEDEETYS HYDAVNKYNS ECTSVMDISP DNVVGAIGEQ QFWKVRRTII NQQKIFVKQV SELHRLIKVQ RLIAGSPHIL LEDNLLHNKP
401: PQKTSTTQKF QSDFAGKKPS SVVKLDNKSV KVNTDEKATN SAVGKIPIPC ISNITKGHAN QLPNYGHHLG NLALGSADSN SKQPPSYVYP PPGNQWLVPV
501: MSPSEGLVYK PIIGPCPPNA GFMAPIYGSC GTMSFNPLSK DASSDATLAP SSHQKLGIIS GSSLSQLPSF MNHPSSLSAS AIEQMGQSNG PENHHSCGEV
601: NSAILHQSSS NMSSPTSQMM SRNISTYHHS LKDKELQRST ASSPSKRMSG EALPLFPLAP TFWQSEDRNT QVEHRPRVIK AMPHNPKTAS ESAARIFRSI
701: QEERKHL

Best Arabidopsis Sequence Match ( AT2G25930.1 )
(BLAST)

001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP

Arabidopsis Description

ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.