CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039156_P001	Maize	nucleus	61.61	70.94
HORVU1Hr1G094980.4	Barley	nucleus	60.0	58.43
TraesCS1A01G443200.2	Wheat	nucleus	60.54	58.34
TraesCS1B01G477400.1	Wheat	nucleus	60.0	58.13
TraesCS1D01G451200.2	Wheat	nucleus	59.6	57.89
EES03137	Sorghum	nucleus	48.32	46.04
GSMUA_Achr2P08490_001	Banana	nucleus	22.28	40.69
GSMUA_Achr6P33500_001	Banana	mitochondrion	20.0	40.05
GSMUA_Achr1P05150_001	Banana	nucleus	21.48	39.7
GSMUA_Achr1P14390_001	Banana	nucleus	27.25	38.16
VIT_04s0008g00660.t01	Wine grape	nucleus	34.23	35.17
Solyc08g065870.2.1	Tomato	nucleus	30.2	34.94
PGSC0003DMT400035914	Potato	nucleus	30.74	34.91
Solyc11g070100.1.1	Tomato	nucleus	26.98	33.33
PGSC0003DMT400065601	Potato	nucleus	28.32	33.12
KRH61488	Soybean	nucleus	31.14	32.49
CDY66493	Canola	nucleus	23.89	32.19
CDY35321	Canola	nucleus	25.37	31.55
KRH05522	Soybean	nucleus	29.93	31.28
Bra034284.1-P	Field mustard	nucleus	25.23	31.23
Bra007774.1-P	Field mustard	nucleus	24.56	30.91
CDY11505	Canola	nucleus	24.3	30.57
CDX76735	Canola	nucleus	24.03	30.55
PGSC0003DMT400075345	Potato	nucleus	28.59	29.62
VIT_09s0002g02680.t01	Wine grape	nucleus	29.26	29.46
KRH47177	Soybean	nucleus	26.71	29.31
Solyc12g095900.1.1	Tomato	nucleus	28.19	29.09
KRH44225	Soybean	nucleus	26.71	28.15
AT2G25930.1	Thale cress	nucleus	25.91	27.77
Solyc06g062480.2.1	Tomato	plasma membrane	22.01	27.24
KRH15494	Soybean	nucleus	15.17	27.03
PGSC0003DMT400012338	Potato	nucleus	23.36	26.65
CDY48882	Canola	nucleus	17.45	26.53
CDY32422	Canola	nucleus, plastid	17.32	26.27
Bra001825.1-P	Field mustard	nucleus	18.39	26.25
CDY62750	Canola	nucleus	16.91	25.77
Bra023887.1-P	Field mustard	nucleus	17.85	25.68
CDY56915	Canola	nucleus	18.25	25.28
Bra031274.1-P	Field mustard	nucleus	18.12	25.19
CDY51450	Canola	nucleus	18.12	25.19
GSMUA_Achr5P09620_001	Banana	unclear	27.25	24.88
AT3G21320.1	Thale cress	nucleus	17.72	24.44

Protein Annotations

EnsemblPlants:OQU78543	EnsemblPlantsGene:SORBI_3009G257300	EntrezGene:8065332	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009791	GO:GO:2000028	PANTHER:PTHR34281	PANTHER:PTHR34281:SF5	ProteinID:EES18809.1
ProteinID:OQU78543	ProteinID:OQU78543.1	ProteinID:OQU78544.1	RefSeq:XP_002440379.1	SEG:seg	unigene:Sbi.8976
UniParc:UPI0001A88901	UniProt:C5YX17	MapMan:15.5.27	MapMan:27.1.6.3.2	:	:

Description

hypothetical protein

Coordinates

chr9:+:59155166..59160131

Molecular Weight (calculated)

80382.8 Da

IEP (calculated)

9.338

GRAVY (calculated)

-0.781

Length

745 amino acids

Sequence
(BLAST)

001: MRRGGAKDDA APDKVMGPLF PRLHVNDTLK GGPRAPPRNK MALYEQFSVP SHRYSAAAAA PPPPSAPAPS PAPPWRAQRP VPATSASQVG GSDRPLFPSF
101: CVPSTEPVRS SDQMNANSNG RAANGTRAES GRQSTHLKSK DTNAAGPTAE CSSRQRENGN KNSSGKKLAN DDDFTVPSVL YSGVPPHSSQ EKLTLFPTTS
201: PCKSVPAKYS SNGKRHLEGI DVSDVKSKGR SGIKDTEPVQ VRIDLEDEET TPSFQILKDK TGRPDPKVSP FMDRLKKYNV ADKQYSEAES YQMRTRNEDA
301: VKTQNPPKNG SVLLSKPYDD REQNGDSDIL KHGLRDTGEK RKRSHHGVEQ NDDLSDSSVE FLAGMEISPD DVVGAIGPKH FWKARRAIVN QQRVFAVQVF
401: ELHRLIKVQK LIAASPHLLI EGDPCLGKSL AASKKKLAGD VEKQLQSAKN NDEVQPTQQQ QLEHSKENTE ANQPSPSQDD AAGVQHNNQA AINGAVSSNP
501: PSMPTPSDNK QNSWCIPPPP SQWLVPVMSP SEGLVYKPYS GHCPPAGSFM APPFFASCGP VSLPSTAGDF MNSAYGVAMP HQPQHMGVPG PPPMPPMYFP
601: PFSMPVMNPA VSASAVEQVS HVAASQRNGH IEQHTRNSCN ASHLRSEAVS AGVWRVHASR DSELQGSSAS SPFDRQQGEG RGPAPPFPAS SVGNRQAQAQ
701: AQASSGSREN PSRVIRVVPH TARTASESAA RIFQSIQMER KQNDP

Best Arabidopsis Sequence Match ( AT2G25930.1 )
(BLAST)

001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP

Arabidopsis Description

ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.