CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44225	Soybean	nucleus	84.09	80.76
GSMUA_Achr6P33500_001	Banana	mitochondrion	18.85	34.41
GSMUA_Achr1P05150_001	Banana	nucleus	20.03	33.75
Os01t0566050-00	Rice	cytosol, nucleus	13.11	32.84
GSMUA_Achr2P08490_001	Banana	nucleus	19.29	32.11
GSMUA_Achr1P14390_001	Banana	nucleus	22.68	28.95
Zm00001d039156_P001	Maize	nucleus	26.51	27.82
CDY32422	Canola	nucleus, plastid	19.73	27.29
VIT_09s0002g02680.t01	Wine grape	nucleus	29.6	27.16
CDY48882	Canola	nucleus	19.59	27.14
KRH61488	Soybean	nucleus	28.28	26.89
Bra023887.1-P	Field mustard	nucleus	20.47	26.83
CDY62750	Canola	nucleus	19.29	26.79
OQU78543	Sorghum	nucleus	29.31	26.71
CDY51450	Canola	nucleus	21.06	26.68
Bra031274.1-P	Field mustard	nucleus	21.06	26.68
AT3G21320.1	Thale cress	nucleus	21.06	26.48
CDY56915	Canola	nucleus	20.91	26.39
TraesCS1A01G443200.2	Wheat	nucleus	29.75	26.13
TraesCS1B01G477400.1	Wheat	nucleus	29.31	25.88
Os06t0142600-01	Rice	nucleus	28.87	25.79
Bra001825.1-P	Field mustard	nucleus	19.73	25.67
HORVU1Hr1G094980.4	Barley	nucleus	28.87	25.62
TraesCS1D01G451200.2	Wheat	nucleus	28.87	25.55
Solyc06g062480.2.1	Tomato	plasma membrane	22.39	25.25
KRH05522	Soybean	nucleus	26.36	25.11
Zm00001d044232_P001	Maize	nucleus	27.84	24.84
KRH15494	Soybean	nucleus	15.17	24.64
PGSC0003DMT400012338	Potato	nucleus	23.56	24.5
EES03137	Sorghum	nucleus	27.54	23.91
Os01t0566100-01	Rice	nucleus	12.52	21.46
GSMUA_Achr5P09620_001	Banana	unclear	22.53	18.75

Protein Annotations

EMBL:ACUP02004138	EnsemblPlants:KRH47177	EnsemblPlantsGene:GLYMA_07G013500	EntrezGene:102663657	GO:GO:0000003	GO:GO:0007275
GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:2000028	PANTHER:PTHR34281	PANTHER:PTHR34281:SF2
ProteinID:KRH47177	ProteinID:KRH47177.1	ProteinID:KRH47178.1	SEG:seg	UniParc:UPI000296599B	UniProt:K7KZ01
MapMan:15.5.27	MapMan:27.1.6.3.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:1036819..1041984

Molecular Weight (calculated)

74567.8 Da

IEP (calculated)

8.283

GRAVY (calculated)

-0.597

Length

679 amino acids

Sequence
(BLAST)

001: MMNRMSGGIE EDKEISPMFP RLHVKDAERG GPKAPPRNKM ALYEQFSLPS QNFAPGSASL FPLPLRNYTG PTSSSHISSN QSIQFCTSSM PSILAEKSQT
101: YNSRKTNLTK FMQDDFINSK NSLRTLDGED TFITCGSAHR KNSSCSIIQN FKDEDKLSHS NLSGSLKSPN SFRKVNSPGA VDLKSAQYGK NRMEDHTEVS
201: QNGQKPEEVL PHSLDGFGDM TDASLISLVK GSSVRTHEEL AVFEDQVNSR DHHIEKPTAN DVHKCAGELE IGRRCFLDKV DMNEDEETYR HSDAVSKVNS
301: ECTLAMDISP DNVVGAIGEQ QFWKVRRTII NQQKIFVKQV FELHRLIKVQ RLIAGSPHVL LEDNLLLNKP PPKTSTSKKF QSDFASQKPS SVVKLDNKSV
401: KVNTAEKATN SAVGKIPIPC ISNTTKGHAN QLPNYGHHLG NPALASADSN SKQSPSYVYP PPGNQWLVPV MSPSEGLVYK PIIWPCPPNA GFMAPIYGSC
501: GTVSFNPLSK DASSDAALAP SSHQKLGILS GSSLPQFLPP SFMNHPSSIS ASAVEQMGQS NGPENHHSWG EVNSAILFQS SSNMSSPTSQ VMPRNISTYH
601: HSLQDKELHR STASSPSKRV SGEALPLFPL APTCWQSEDT NTQVEQQPRV IKAMPHNPKT ASETAAKIFR SIQEERKHL

Best Arabidopsis Sequence Match ( AT3G21320.1 )
(BLAST)

001: MGGMKDEAKR ITIPPLFPRV HVNDTGRGGL SQQFDGKTMS LVSSKRPNLP SPTNNISDSL STFSLSLPPP PNNARLIDGP EKNQFSPIYN TKFEGKLNKK
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS

Arabidopsis Description

EARLY FLOWERING protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0C8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.