Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001825.1-P | Field mustard | nucleus | 93.06 | 87.36 |
| CDY32422 | Canola | nucleus, plastid | 84.69 | 84.52 |
| CDY62750 | Canola | nucleus | 66.53 | 66.67 |
| CDY51450 | Canola | nucleus | 70.61 | 64.55 |
| AT3G21320.1 | Thale cress | nucleus | 70.41 | 63.89 |
| CDY56915 | Canola | nucleus | 69.39 | 63.2 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 24.9 | 32.8 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 24.9 | 30.27 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 15.92 | 28.78 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 18.98 | 22.79 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 23.06 | 21.24 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 25.71 | 20.93 |
| CDY66493 | Canola | nucleus | 22.24 | 19.71 |
| CDX76735 | Canola | nucleus | 23.47 | 19.62 |
| KRH47177 | Soybean | nucleus | 27.14 | 19.59 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 29.39 | 19.46 |
| CDY11505 | Canola | nucleus | 23.27 | 19.26 |
| KRH44225 | Soybean | nucleus | 27.55 | 19.09 |
| Zm00001d039156_P001 | Maize | nucleus | 25.1 | 19.01 |
| PGSC0003DMT400012338 | Potato | nucleus | 25.31 | 18.99 |
| CDY35321 | Canola | nucleus | 21.63 | 17.7 |
| Os06t0142600-01 | Rice | nucleus | 27.14 | 17.5 |
| OQU78543 | Sorghum | nucleus | 26.53 | 17.45 |
| EES03137 | Sorghum | nucleus | 26.94 | 16.88 |
| Zm00001d044232_P001 | Maize | nucleus | 26.12 | 16.82 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 26.12 | 16.73 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 25.51 | 16.25 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 25.31 | 16.17 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 25.31 | 16.04 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 23.67 | 14.22 |
| Os01t0566100-01 | Rice | nucleus | 7.96 | 9.85 |
Protein Annotations
| EnsemblPlants:CDY48882 | EnsemblPlantsGene:GSBRNA2T00091949001 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | ProteinID:CDY48882 | ProteinID:CDY48882.1 | SEG:seg |
| UniParc:UPI0004EE07AA | UniProt:A0A078IFV4 | MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : |
Description
BnaA03g36210DBnaA03g36210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFV4]
Coordinates
chrLK032799:-:28671..30770
Molecular Weight (calculated)
54903.3 Da
IEP (calculated)
9.585
GRAVY (calculated)
-0.713
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGMKDEAKR ITIPPLFQRV HLNDTVRNGK SMSLHKRSNL PSLTNKISDS SSTLSLSLPP PADNACLTTD QPEKNHFSPI CNTSPTTNLE EKLNKTAMNY
101: PSPRESSVTN TKPSSIKQNE YHFKSLANLD SLKAALNNLH IPELLLPQCF EDESQNESLN VMKTQKKPKT VPPCEQDVSD CSEIDSLSGI SASSNDAARV
201: IGDKRFWKMR TYMINQQKIF EAQVFELHRL IMVQKMVARS PNLVLKSRFN GDTMRLSHSH LPEMAASKVK KTITKKHKPV TEEYPDHMKP KVPLPSINKD
301: LMTPMWPQQL VPPPGNQWLV PVMTPSEGLV YKPYAGPSPP PSSAFMVPFY GQDSLNPTLG FPVSTQLSHN YFPQPNARTS LDQTNPFGQL QRWSNTSSHM
401: TQAVPFSLKK SQESNDSDVH GSTASSPPEK HKSDVLPLFP TEPTHHTDEY EQKQKPMRRA IRAIPHNSTS ASESAARIFR SIQEGLRSYD
101: PSPRESSVTN TKPSSIKQNE YHFKSLANLD SLKAALNNLH IPELLLPQCF EDESQNESLN VMKTQKKPKT VPPCEQDVSD CSEIDSLSGI SASSNDAARV
201: IGDKRFWKMR TYMINQQKIF EAQVFELHRL IMVQKMVARS PNLVLKSRFN GDTMRLSHSH LPEMAASKVK KTITKKHKPV TEEYPDHMKP KVPLPSINKD
301: LMTPMWPQQL VPPPGNQWLV PVMTPSEGLV YKPYAGPSPP PSSAFMVPFY GQDSLNPTLG FPVSTQLSHN YFPQPNARTS LDQTNPFGQL QRWSNTSSHM
401: TQAVPFSLKK SQESNDSDVH GSTASSPPEK HKSDVLPLFP TEPTHHTDEY EQKQKPMRRA IRAIPHNSTS ASESAARIFR SIQEGLRSYD
001: MGGMKDEAKR ITIPPLFPRV HVNDTGRGGL SQQFDGKTMS LVSSKRPNLP SPTNNISDSL STFSLSLPPP PNNARLIDGP EKNQFSPIYN TKFEGKLNKK
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
Arabidopsis Description
EARLY FLOWERING protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0C8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.