Factsheet for GSMUA_Achr2P08490_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P14390_001	Banana	nucleus	50.0	38.35
GSMUA_Achr6P33500_001	Banana	mitochondrion	27.7	30.38
GSMUA_Achr1P05150_001	Banana	nucleus	28.92	29.28
Os01t0566050-00	Rice	cytosol, nucleus	17.89	26.94
Solyc11g070100.1.1	Tomato	nucleus	36.27	24.54
Solyc08g065870.2.1	Tomato	nucleus	37.75	23.91
VIT_04s0008g00660.t01	Wine grape	nucleus	41.67	23.45
PGSC0003DMT400035914	Potato	nucleus	37.5	23.32
Bra034284.1-P	Field mustard	nucleus	34.07	23.09
Zm00001d039156_P001	Maize	nucleus	36.27	22.87
CDY35321	Canola	nucleus	33.33	22.7
PGSC0003DMT400065601	Potato	nucleus	35.29	22.61
CDY66493	Canola	nucleus	30.64	22.6
CDX76735	Canola	nucleus	32.35	22.53
OQU78543	Sorghum	nucleus	40.69	22.28
VIT_09s0002g02680.t01	Wine grape	nucleus	40.2	22.16
Bra007774.1-P	Field mustard	nucleus	31.86	21.96
CDY11505	Canola	nucleus	31.62	21.79
HORVU1Hr1G094980.4	Barley	nucleus	39.71	21.18
KRH61488	Soybean	nucleus	37.01	21.15
TraesCS1D01G451200.2	Wheat	nucleus	39.71	21.12
TraesCS1B01G477400.1	Wheat	nucleus	39.71	21.07
TraesCS1A01G443200.2	Wheat	nucleus	39.71	20.96
Os06t0142600-01	Rice	nucleus	38.97	20.92
GSMUA_Achr5P09620_001	Banana	unclear	40.44	20.22
KRH15494	Soybean	nucleus	20.59	20.1
EES03137	Sorghum	nucleus	38.48	20.08
Zm00001d044232_P001	Maize	nucleus	37.25	19.97
KRH05522	Soybean	nucleus	34.8	19.92
PGSC0003DMT400075345	Potato	nucleus	34.56	19.61
KRH47177	Soybean	nucleus	32.11	19.29
Solyc12g095900.1.1	Tomato	nucleus	34.07	19.25
CDY32422	Canola	nucleus, plastid	23.04	19.14
Bra023887.1-P	Field mustard	nucleus	24.26	19.11
CDY48882	Canola	nucleus	22.79	18.98
Bra001825.1-P	Field mustard	nucleus	24.02	18.77
AT2G25930.1	Thale cress	nucleus	31.86	18.7
KRH44225	Soybean	nucleus	32.35	18.67
CDY62750	Canola	nucleus	22.3	18.61
Solyc06g062480.2.1	Tomato	plasma membrane	26.23	17.77
AT3G21320.1	Thale cress	nucleus	23.28	17.59
CDY56915	Canola	nucleus	23.04	17.47
CDY51450	Canola	nucleus	22.79	17.35
Bra031274.1-P	Field mustard	nucleus	22.79	17.35
PGSC0003DMT400012338	Potato	nucleus	26.47	16.54
Os01t0566100-01	Rice	nucleus	15.44	15.91

Protein Annotations

EnsemblPlants:GSMUA_Achr2P08490_001	EnsemblPlants:GSMUA_Achr2T08490_001	EnsemblPlantsGene:GSMUA_Achr2G08490_001	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009791	GO:GO:2000028	PANTHER:PTHR34281	UniParc:UPI000295BD28	UniProt:M0S690
MapMan:15.5.27	MapMan:27.1.6.3.2	:	:	:	:

Description

ELF3 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G08490_001]

Coordinates

chr2:+:12487685..12491024

Molecular Weight (calculated)

45063.2 Da

IEP (calculated)

8.735

GRAVY (calculated)

-0.534

Length

408 amino acids

Sequence
(BLAST)

001: METLFPRLHV NDTEKGGPRS PPRNKMALYE QLSVPSQRLS RPSSALQLPY RNTCMLVPSD SSSQGCGHEK DVLCPFYMPR HMPVYSSERV DSQSSNGIYH
101: NSLSPTARVP ELPIVSKVLD SAILRDVEKS PCGDTGSCRE PYGNDDLSGP RTSNVENGDA SQKRHRTPND VDNCNLENSV KENGWPEAFF WKARRAIVNQ
201: QRVFAIQVFE LHRLIKVQKS IAGSPYLLLE GNPYLCRSPA KIPSKIPLLD SDGGPHSEYL PSVSAAPDYN PTPWCFHQLE NQWLVLVMSP SKGLIYKPYS
301: GPSAPTSGFL APVYASCTPL GLPPLAGNFM NTVYGVAAFH GSPSLGVRAS AITTNYFPTY ENLAPSQLSS RDNRTRSIKV VPRNARSATQ STARIFQSRQ
401: EEQQQHGS

Best Arabidopsis Sequence Match ( AT2G25930.1 )
(BLAST)

001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP

Arabidopsis Description

ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.