Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66493 | Canola | nucleus | 46.04 | 57.87 |
| Bra034284.1-P | Field mustard | nucleus | 48.49 | 55.98 |
| CDY35321 | Canola | nucleus | 47.19 | 54.76 |
| CDY11505 | Canola | nucleus | 46.62 | 54.73 |
| CDX76735 | Canola | nucleus | 45.76 | 54.27 |
| Bra007774.1-P | Field mustard | nucleus | 45.61 | 53.55 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 38.13 | 36.55 |
| Solyc11g070100.1.1 | Tomato | nucleus | 30.79 | 35.49 |
| Solyc08g065870.2.1 | Tomato | nucleus | 32.81 | 35.4 |
| PGSC0003DMT400035914 | Potato | nucleus | 32.95 | 34.91 |
| PGSC0003DMT400065601 | Potato | nucleus | 30.36 | 33.12 |
| KRH61488 | Soybean | nucleus | 33.81 | 32.91 |
| PGSC0003DMT400075345 | Potato | nucleus | 33.81 | 32.68 |
| KRH15494 | Soybean | nucleus | 19.57 | 32.54 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 17.41 | 32.53 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 18.56 | 32.01 |
| KRH05522 | Soybean | nucleus | 32.81 | 31.98 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 24.46 | 31.95 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 18.7 | 31.86 |
| Solyc12g095900.1.1 | Tomato | nucleus | 32.66 | 31.44 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 10.94 | 28.04 |
| Zm00001d039156_P001 | Maize | nucleus | 24.46 | 26.28 |
| OQU78543 | Sorghum | nucleus | 27.77 | 25.91 |
| Os06t0142600-01 | Rice | nucleus | 27.91 | 25.53 |
| Zm00001d044232_P001 | Maize | nucleus | 26.62 | 24.31 |
| EES03137 | Sorghum | nucleus | 26.76 | 23.79 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 25.9 | 23.53 |
| AT3G21320.1 | Thale cress | nucleus | 17.7 | 22.78 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 25.18 | 22.76 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 25.18 | 22.64 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 24.89 | 22.56 |
| Os01t0566100-01 | Rice | nucleus | 10.94 | 19.19 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 22.3 | 19.0 |
Protein Annotations
| MapMan:15.5.27 | MapMan:27.1.6.3.2 | EntrezGene:817134 | ProteinID:AAC31242.1 | ProteinID:AAM15042.1 | ProteinID:AEC07774.1 |
| ArrayExpress:AT2G25930 | EnsemblPlantsGene:AT2G25930 | RefSeq:AT2G25930 | TAIR:AT2G25930 | RefSeq:AT2G25930-TAIR-G | EnsemblPlants:AT2G25930.1 |
| TAIR:AT2G25930.1 | EMBL:AY136385 | EMBL:BT000185 | Symbol:ELF3 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009409 | GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009737 | GO:GO:0009791 | GO:GO:0009826 | GO:GO:0009908 | GO:GO:0009909 |
| GO:GO:0009987 | GO:GO:0010017 | GO:GO:0010031 | GO:GO:0010119 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0040007 | GO:GO:0048511 | GO:GO:0048573 | GO:GO:2000028 | RefSeq:NP_180164.1 | UniProt:O82804 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR34281 | PANTHER:PTHR34281:SF2 | UniParc:UPI0000129E4E | EMBL:Y11994 | SEG:seg | : |
Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
Coordinates
chr2:+:11058944..11063324
Molecular Weight (calculated)
77210.1 Da
IEP (calculated)
8.685
GRAVY (calculated)
-0.918
Length
695 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.