Factsheet for Bra034284.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35321	Canola	nucleus	93.52	93.99
Bra007774.1-P	Field mustard	nucleus	50.66	51.52
AT2G25930.1	Thale cress	nucleus	55.98	48.49
GSMUA_Achr2P08490_001	Banana	nucleus	23.09	34.07
PGSC0003DMT400035914	Potato	nucleus	34.22	31.4
GSMUA_Achr1P14390_001	Banana	nucleus	27.74	31.39
Solyc08g065870.2.1	Tomato	nucleus	32.56	30.43
GSMUA_Achr6P33500_001	Banana	mitochondrion	18.77	30.38
Solyc11g070100.1.1	Tomato	nucleus	30.4	30.35
VIT_04s0008g00660.t01	Wine grape	nucleus	36.54	30.34
GSMUA_Achr1P05150_001	Banana	nucleus	19.77	29.53
PGSC0003DMT400065601	Potato	nucleus	30.56	28.89
KRH61488	Soybean	nucleus	33.89	28.57
Os01t0566050-00	Rice	cytosol, nucleus	12.62	28.04
KRH15494	Soybean	nucleus	19.44	27.99
KRH05522	Soybean	nucleus	32.72	27.63
PGSC0003DMT400075345	Potato	nucleus	32.89	27.54
Zm00001d039156_P001	Maize	nucleus	29.24	27.2
Solyc12g095900.1.1	Tomato	nucleus	31.89	26.59
OQU78543	Sorghum	nucleus	31.23	25.23
Os06t0142600-01	Rice	nucleus	30.73	24.34
HORVU1Hr1G094980.4	Barley	nucleus	29.9	23.53
TraesCS1A01G443200.2	Wheat	nucleus	29.9	23.29
TraesCS1B01G477400.1	Wheat	nucleus	29.73	23.28
TraesCS1D01G451200.2	Wheat	nucleus	29.57	23.21
Zm00001d044232_P001	Maize	nucleus	29.24	23.13
EES03137	Sorghum	nucleus	29.57	22.76
Bra023887.1-P	Field mustard	nucleus	19.44	22.59
Bra031274.1-P	Field mustard	nucleus	19.44	21.83
Bra001825.1-P	Field mustard	nucleus	18.11	20.88
Os01t0566100-01	Rice	nucleus	12.29	18.69
GSMUA_Achr5P09620_001	Banana	unclear	23.42	17.28

Protein Annotations

EnsemblPlants:Bra034284.1	EnsemblPlants:Bra034284.1-P	EnsemblPlantsGene:Bra034284	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009791	GO:GO:2000028	PANTHER:PTHR34281	PANTHER:PTHR34281:SF2	SEG:seg
UniParc:UPI00025450E6	UniProt:M4EZP1	MapMan:15.5.27	MapMan:27.1.6.3.2	:	:

Description

AT2G25930 (E=3e-105) ELF3, PYK20 | ELF3 (EARLY FLOWERING 3); protein C-terminus binding / transcription factor

Coordinates

chrA04:+:11634572..11637705

Molecular Weight (calculated)

66696.7 Da

IEP (calculated)

7.040

GRAVY (calculated)

-0.914

Length

602 amino acids

Sequence
(BLAST)

001: MKRGKEEEEE KKLEPMFPRL HVNDADKGGG PRAPPRNKMA LYEHLTIPSH RFTDHHSSSP RHTNTLFPPP PPPGPSNQPC GVERNLTSQH LDSSASGHVT
101: QMSSMEYVTT SAHRRRDQRK TLREEDDFAV PVYDNDSSTR FQSPGRRNGE KRTTLFGDQA KGSSSSKRHG MDLEKSASGC ERVNASFLLR QESTSSRLEL
201: DQDGDETGVM ETDDGVESHG DPNDVDNDDV SDDSISSVDV SPDEVVGVIG QKRFWRARKA IANQQRIFAV QLFELHRLIK VQRLIASSSD VLLDEISYLG
301: NVPVKKLLPS EFIVKPPPLP HATKHRRGDP EKTDQDKMEC SAENVVGKLS NQGQQHQPSN YMPFASNPPT AVNGCYYPPP PSGGNQQWLI PVMSPSEGLI
401: YKPHPGPGPP VCGGYYGHFM PAPMMMGSFM GGGPPPFHPG VGNGYFPPYG MMNPYGSGHQ QQQQPSEQMN QFVHPVNTQQ QISVNEAISQ QQPTKSYPRA
501: RKSRQRSTGS SPRGPEGISD TNSFRPLSVV DDDDNNEPEQ MMTTTTTTTR TTVTQTTRDG GAVTRVIKVV PHNAKLASEN AARIFRSIQE ERKHYDSFSN
601: HS

Best Arabidopsis Sequence Match ( AT2G25930.1 )
(BLAST)

001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP

Arabidopsis Description

ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.