Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075345 | Potato | nucleus | 89.47 | 89.85 |
| Solyc11g070100.1.1 | Tomato | nucleus | 41.14 | 49.25 |
| Solyc08g065870.2.1 | Tomato | nucleus | 41.97 | 47.05 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 41.14 | 40.97 |
| KRH61488 | Soybean | nucleus | 38.92 | 39.36 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 19.94 | 38.71 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 20.08 | 35.98 |
| CDY66493 | Canola | nucleus | 27.15 | 35.44 |
| KRH05522 | Soybean | nucleus | 34.49 | 34.92 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 19.25 | 34.07 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 24.93 | 33.83 |
| Bra007774.1-P | Field mustard | nucleus | 27.56 | 33.61 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 12.6 | 33.58 |
| CDY11505 | Canola | nucleus | 27.15 | 33.11 |
| AT2G25930.1 | Thale cress | nucleus | 31.44 | 32.66 |
| CDX76735 | Canola | nucleus | 26.45 | 32.59 |
| CDY35321 | Canola | nucleus | 27.01 | 32.55 |
| Bra034284.1-P | Field mustard | nucleus | 26.59 | 31.89 |
| KRH15494 | Soybean | nucleus | 17.59 | 30.38 |
| Zm00001d039156_P001 | Maize | nucleus | 26.04 | 29.06 |
| OQU78543 | Sorghum | nucleus | 29.09 | 28.19 |
| Os06t0142600-01 | Rice | nucleus | 28.12 | 26.71 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 28.12 | 26.54 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 28.25 | 26.53 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 28.39 | 26.52 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 27.84 | 26.21 |
| Zm00001d044232_P001 | Maize | nucleus | 27.15 | 25.76 |
| EES03137 | Sorghum | nucleus | 26.73 | 24.68 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 20.08 | 24.09 |
| Os01t0566100-01 | Rice | nucleus | 10.94 | 19.95 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 21.61 | 19.12 |
Protein Annotations
| EnsemblPlants:Solyc12g095900.1.1 | EnsemblPlantsGene:Solyc12g095900.1 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | ncoils:Coil | SEG:seg | UniParc:UPI0002769A0C | UniProt:K4DH63 |
| MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:65005044..65011141
Molecular Weight (calculated)
79112.9 Da
IEP (calculated)
8.905
GRAVY (calculated)
-0.685
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGKGEEKL MGPMFPRLHV NDTEKGGPKA PPRNKMALYE QLSIPSQRFK YGISNNRNNA DIQGNGREND DFFSVQLPPS RHPAENPHSC SSNSKTPLLP
101: VESNKKTEED DFRVPIFVKS KASQGNGKLY STLDGRKLSA STAVISGHSR KDLNDENFKQ IAVGREISCN STSIPSMDKL DDLLKKADVQ LQYEPRNDPD
201: NTLGILCKND LLQPECRVDP QVGGTMLSEP VRVVDIGDSS LLVKDVASKE HIIPNNNQSN DKESKEDKAS ESLQTKIVNQ DDDLSETSMV ESIFGMYISP
301: DDVVAIIGQK HFWNARRAIA TQQRAFAVQV FELHRLIKVQ RLIASSQSML EDSAYLSKAV KDSSPKKLPL EYIARDGHNV PKQRKNFEKP NTRMECSAEN
401: TEGKPVKDSS AKRLLLEYIP RDGHNVSKQK KDFEKPNISM ECSAENTVGK GSFSSVQNNS QSSSYSLFSG HPIANDSTMG GPWSFNQPSG HQWLIPVMTP
501: SEGLVYKPYL GPGVTSSICG GYGPPGSTPI IGNHSAPSYG IPASHHQYQG VRMPFTPPAG HNYFPSYGIP AINPAISSSA VDQSSLFVAQ GLQGQLSGGG
601: ANFSVQRQNS SNMPSNKNGT FPEVKSRSCR DAEMQASTAS SPSGTANKIT VDNATERRNV LPLFPTSPAT KNLDISSQPQ LPSHHARVIK VVPRNARSAT
701: ESAARIFQSI QEERKQYDSV VN
101: VESNKKTEED DFRVPIFVKS KASQGNGKLY STLDGRKLSA STAVISGHSR KDLNDENFKQ IAVGREISCN STSIPSMDKL DDLLKKADVQ LQYEPRNDPD
201: NTLGILCKND LLQPECRVDP QVGGTMLSEP VRVVDIGDSS LLVKDVASKE HIIPNNNQSN DKESKEDKAS ESLQTKIVNQ DDDLSETSMV ESIFGMYISP
301: DDVVAIIGQK HFWNARRAIA TQQRAFAVQV FELHRLIKVQ RLIASSQSML EDSAYLSKAV KDSSPKKLPL EYIARDGHNV PKQRKNFEKP NTRMECSAEN
401: TEGKPVKDSS AKRLLLEYIP RDGHNVSKQK KDFEKPNISM ECSAENTVGK GSFSSVQNNS QSSSYSLFSG HPIANDSTMG GPWSFNQPSG HQWLIPVMTP
501: SEGLVYKPYL GPGVTSSICG GYGPPGSTPI IGNHSAPSYG IPASHHQYQG VRMPFTPPAG HNYFPSYGIP AINPAISSSA VDQSSLFVAQ GLQGQLSGGG
601: ANFSVQRQNS SNMPSNKNGT FPEVKSRSCR DAEMQASTAS SPSGTANKIT VDNATERRNV LPLFPTSPAT KNLDISSQPQ LPSHHARVIK VVPRNARSAT
701: ESAARIFQSI QEERKQYDSV VN
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.