CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05522	Soybean	nucleus	57.42	33.66
KRH61488	Soybean	nucleus	43.78	25.63
GSMUA_Achr1P14390_001	Banana	nucleus	27.03	21.24
CDX76735	Canola	nucleus	29.67	21.16
CDY11505	Canola	nucleus	29.9	21.11
Bra007774.1-P	Field mustard	nucleus	29.43	20.78
CDY66493	Canola	nucleus	27.27	20.61
GSMUA_Achr2P08490_001	Banana	nucleus	20.1	20.59
Solyc11g070100.1.1	Tomato	nucleus	29.43	20.4
PGSC0003DMT400065601	Potato	nucleus	30.86	20.25
Solyc08g065870.2.1	Tomato	nucleus	31.1	20.19
CDY35321	Canola	nucleus	28.23	19.7
AT2G25930.1	Thale cress	nucleus	32.54	19.57
Bra034284.1-P	Field mustard	nucleus	27.99	19.44
VIT_04s0008g00660.t01	Wine grape	nucleus	33.49	19.31
PGSC0003DMT400035914	Potato	nucleus	30.14	19.21
Os01t0566100-01	Rice	nucleus	18.18	19.19
PGSC0003DMT400075345	Potato	nucleus	31.1	18.08
Zm00001d039156_P001	Maize	nucleus	27.27	17.62
Solyc12g095900.1.1	Tomato	nucleus	30.38	17.59
KRH47177	Soybean	nucleus	24.64	15.17
OQU78543	Sorghum	nucleus	27.03	15.17
TraesCS1B01G477400.1	Wheat	nucleus	27.51	14.95
GSMUA_Achr1P05150_001	Banana	nucleus	14.35	14.89
GSMUA_Achr6P33500_001	Banana	mitochondrion	13.16	14.78
TraesCS1D01G451200.2	Wheat	nucleus	27.03	14.73
TraesCS1A01G443200.2	Wheat	nucleus	27.03	14.62
Os06t0142600-01	Rice	nucleus	26.32	14.47
HORVU1Hr1G094980.4	Barley	nucleus	26.08	14.25
Zm00001d044232_P001	Maize	nucleus	25.36	13.93
EES03137	Sorghum	nucleus	25.6	13.68
KRH44225	Soybean	nucleus	22.73	13.44
GSMUA_Achr5P09620_001	Banana	unclear	25.12	12.87
Os01t0566050-00	Rice	cytosol, nucleus	2.15	3.32

Protein Annotations

EMBL:ACUP02008608	EnsemblPlants:KRH15494	EnsemblPlantsGene:GLYMA_14G091900	EntrezGene:100818279	GO:GO:0000003	GO:GO:0007275
GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:2000028	PANTHER:PTHR34281	PANTHER:PTHR34281:SF2
ProteinID:KRH15494	ProteinID:KRH15494.1	UniParc:UPI000233B714	UniProt:A0A0R0GBQ2	MapMan:15.5.27	MapMan:27.1.6.3.2

Description

hypothetical protein

Coordinates

chr14:+:8529300..8534053

Molecular Weight (calculated)

46249.5 Da

IEP (calculated)

9.309

GRAVY (calculated)

-0.769

Length

418 amino acids

Sequence
(BLAST)

001: MKRGNEEEKS AGPMFPRLHV NDAEKGGPRA PPRNKMALYE QFSIPSQRFN PHLPRKPNSS SNIVPPPTSS TEGNGRERSY ISRQSDDGAR SNTSLVQLER
101: RKKVDDGIHV YTCSRIDQSN DKMLESFNGK KLTPFGARNF CYSVAVQNGG DKDTTQFGFL PADMRKDARK GNEANPHVSS SRQKLKLSVK PKSSGEIIDS
201: LVMQAKVIPN QEDQDYSVPN INRLHQDDAC LQKECVAGSQ SNDIEHGGDL LNSTRDMDNG NALVPRGCFH SAANQTHPLE ATNDAEYHDT RTGGPIQKGN
301: FDESDNISKI STVTNLSSLI VSPDDVVGIL GQKHFWKARR KIANQQSVFA VQVFELHRLI KVQQLIAASP DVLLEDGAFM GKFPLMGSPP KNKNISLEVV
401: VEPQQQNPKQ KTILKAKP

Best Arabidopsis Sequence Match ( AT2G25930.1 )
(BLAST)

001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP

Arabidopsis Description

ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.