Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G451200.2 | Wheat | nucleus | 96.36 | 96.61 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 91.68 | 91.2 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 86.87 | 87.32 |
| OQU78543 | Sorghum | nucleus | 58.13 | 60.0 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 20.81 | 59.04 |
| Zm00001d039156_P001 | Maize | nucleus | 45.77 | 54.4 |
| Os06t0142600-01 | Rice | nucleus | 48.5 | 49.08 |
| Os01t0566100-01 | Rice | nucleus | 21.98 | 42.68 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 20.03 | 41.4 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 21.59 | 41.19 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 21.07 | 39.71 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 26.92 | 38.91 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 31.34 | 33.24 |
| PGSC0003DMT400035914 | Potato | nucleus | 27.83 | 32.62 |
| Solyc08g065870.2.1 | Tomato | nucleus | 27.05 | 32.3 |
| Solyc11g070100.1.1 | Tomato | nucleus | 25.1 | 32.01 |
| PGSC0003DMT400065601 | Potato | nucleus | 26.14 | 31.55 |
| CDY66493 | Canola | nucleus | 22.63 | 31.46 |
| KRH61488 | Soybean | nucleus | 28.61 | 30.81 |
| Bra007774.1-P | Field mustard | nucleus | 23.67 | 30.74 |
| CDY11505 | Canola | nucleus | 23.54 | 30.57 |
| CDX76735 | Canola | nucleus | 23.28 | 30.55 |
| Bra034284.1-P | Field mustard | nucleus | 23.28 | 29.73 |
| KRH05522 | Soybean | nucleus | 27.57 | 29.73 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 28.48 | 29.59 |
| KRH47177 | Soybean | nucleus | 25.88 | 29.31 |
| CDY35321 | Canola | nucleus | 22.76 | 29.22 |
| PGSC0003DMT400075345 | Potato | nucleus | 26.53 | 28.37 |
| Solyc12g095900.1.1 | Tomato | nucleus | 26.53 | 28.25 |
| KRH15494 | Soybean | nucleus | 14.95 | 27.51 |
| CDY32422 | Canola | nucleus, plastid | 17.17 | 26.88 |
| KRH44225 | Soybean | nucleus | 24.71 | 26.87 |
| PGSC0003DMT400012338 | Potato | nucleus | 22.37 | 26.34 |
| Bra001825.1-P | Field mustard | nucleus | 17.69 | 26.05 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 20.29 | 25.91 |
| CDY56915 | Canola | nucleus | 17.95 | 25.65 |
| CDY48882 | Canola | nucleus | 16.25 | 25.51 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 27.05 | 25.49 |
| AT2G25930.1 | Thale cress | nucleus | 22.76 | 25.18 |
| CDY62750 | Canola | nucleus | 15.86 | 24.95 |
| Bra023887.1-P | Field mustard | nucleus | 16.77 | 24.9 |
| CDY51450 | Canola | nucleus | 17.17 | 24.63 |
| Bra031274.1-P | Field mustard | nucleus | 17.17 | 24.63 |
| AT3G21320.1 | Thale cress | nucleus | 17.17 | 24.44 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G477400.1 | EnsemblPlantsGene:TraesCS1B01G477400 | PANTHER:PTHR34281 | PANTHER:PTHR34281:SF5 | SEG:seg | MapMan:15.5.27 |
| MapMan:27.1.6.3.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:685645287..685649392
Molecular Weight (calculated)
82128.1 Da
IEP (calculated)
9.455
GRAVY (calculated)
-0.736
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRAGGKDGG EDKVMGPLFP RLHVNDTTLK GGGPRAPPRN KMALYEQFSV PSQRFAANAA NTAPAAAHRP AASYAAVSSA SAGQIGGIDR PLFPSFCVPS
101: NEPVRLPEHI KTNSSGRDGQ AISGRLSTQL KSKDAYAAGS TAECSSSQRR DNNNNSMKNS SGKKLTNDDD FTVPSVFCSG ARPRSNHEEV RIQENATPFP
201: ATSPYKSGPT VSKPTAKFPN TDKRYLEGRN ASDTRSRDSP SIIRDKAPAN TTTNFLETEE RTSSFQFSAE KTMGKRDDKG SSYSRVKETS SINVSDKQHS
301: RNEGHQARTR NENAAESQNA AKAGNGPYST DVACNGASNL SEKGLRETGE KRKRSTGHHD VQRDDSSDSS VESLPDLEIS PDDVVGAIGP KHFWKARRAI
401: VNQQRVFAVQ VFELHRLIKV QKLIAASPHL LIEGDPCLGS ALVTSKKKTA AANVEKQLLS AKSKDDDDAQ LTLQQAEYSK DNTEGNQASP SQDNDVVEVR
501: HENQAASNGA VSSNPPAMPA PPDNKQNNWC APPPQNQWLV PVMSPSEGFV YKPYTGPCPP AGSILAPFYA SCAPLSLPST AGEFMNSPYG IPMPHQPQHM
601: GVGGPPAMPP MYFPPFSVPV MNPVVSSSAV EQVSRVATAR PNTHVEHHSR SSCNMRNEAV SAGGVWRFHS SRGSELQGSS AASSPFDRQQ GQGEARGPAA
701: AAPAAPLPTS SAGNGNAAQQ PQVSSSSQEN PVAAAARVIR VVPHTARTAS ESAARIFRSI QMERQQNGP
101: NEPVRLPEHI KTNSSGRDGQ AISGRLSTQL KSKDAYAAGS TAECSSSQRR DNNNNSMKNS SGKKLTNDDD FTVPSVFCSG ARPRSNHEEV RIQENATPFP
201: ATSPYKSGPT VSKPTAKFPN TDKRYLEGRN ASDTRSRDSP SIIRDKAPAN TTTNFLETEE RTSSFQFSAE KTMGKRDDKG SSYSRVKETS SINVSDKQHS
301: RNEGHQARTR NENAAESQNA AKAGNGPYST DVACNGASNL SEKGLRETGE KRKRSTGHHD VQRDDSSDSS VESLPDLEIS PDDVVGAIGP KHFWKARRAI
401: VNQQRVFAVQ VFELHRLIKV QKLIAASPHL LIEGDPCLGS ALVTSKKKTA AANVEKQLLS AKSKDDDDAQ LTLQQAEYSK DNTEGNQASP SQDNDVVEVR
501: HENQAASNGA VSSNPPAMPA PPDNKQNNWC APPPQNQWLV PVMSPSEGFV YKPYTGPCPP AGSILAPFYA SCAPLSLPST AGEFMNSPYG IPMPHQPQHM
601: GVGGPPAMPP MYFPPFSVPV MNPVVSSSAV EQVSRVATAR PNTHVEHHSR SSCNMRNEAV SAGGVWRFHS SRGSELQGSS AASSPFDRQQ GQGEARGPAA
701: AAPAAPLPTS SAGNGNAAQQ PQVSSSSQEN PVAAAARVIR VVPHTARTAS ESAARIFRSI QMERQQNGP
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.