Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 2
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012338 | Potato | nucleus | 71.59 | 66.0 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 22.92 | 37.1 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 15.95 | 35.42 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 22.26 | 33.25 |
| Bra023887.1-P | Field mustard | nucleus | 23.42 | 27.22 |
| AT3G21320.1 | Thale cress | nucleus | 23.92 | 26.67 |
| Bra031274.1-P | Field mustard | nucleus | 23.59 | 26.49 |
| CDY51450 | Canola | nucleus | 23.59 | 26.49 |
| CDY56915 | Canola | nucleus | 23.59 | 26.39 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 17.77 | 26.23 |
| CDY62750 | Canola | nucleus | 21.26 | 26.18 |
| CDY32422 | Canola | nucleus, plastid | 21.26 | 26.07 |
| CDY48882 | Canola | nucleus | 20.93 | 25.71 |
| Bra001825.1-P | Field mustard | nucleus | 21.76 | 25.1 |
| Solyc08g065870.2.1 | Tomato | nucleus | 26.74 | 25.0 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 21.43 | 24.25 |
| Solyc11g070100.1.1 | Tomato | nucleus | 23.92 | 23.88 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 28.41 | 23.11 |
| KRH47177 | Soybean | nucleus | 25.25 | 22.39 |
| OQU78543 | Sorghum | nucleus | 27.24 | 22.01 |
| Zm00001d039156_P001 | Maize | nucleus | 23.42 | 21.79 |
| KRH44225 | Soybean | nucleus | 25.42 | 21.64 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 26.58 | 20.7 |
| Os06t0142600-01 | Rice | nucleus | 25.75 | 20.39 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 25.91 | 20.29 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 25.75 | 20.21 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 25.58 | 20.13 |
| Solyc12g095900.1.1 | Tomato | nucleus | 24.09 | 20.08 |
| EES03137 | Sorghum | nucleus | 24.58 | 18.93 |
| Zm00001d044232_P001 | Maize | nucleus | 23.92 | 18.92 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 19.6 | 14.46 |
| Os01t0566100-01 | Rice | nucleus | 5.81 | 8.84 |
Protein Annotations
| EnsemblPlants:Solyc06g062480.2.1 | EnsemblPlantsGene:Solyc06g062480.2 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | SEG:seg | UniParc:UPI0002766769 | UniProt:K4C6X9 |
| MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:39419750..39423316
Molecular Weight (calculated)
66579.0 Da
IEP (calculated)
8.073
GRAVY (calculated)
-0.540
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQTKEVQEH PLETKWLFVN SRHPDRLKVS PLVLLLQPCK CYLIVETLFL QHLLLLEHSG SQAGDQAKYQ KREHCVKLPA PHLSTIETTV VHETPTPGHS
101: KLNISKSFVS SAPENRCGLV GDLNRCSDSN SESDEDSWIL HKRKAAEDVT NAKHEDASTK RCASIMEGPS CSFLPHGNSH QSPKRAKSSS DCPEDQISGA
201: PDVAGEERSE GISEASSLNS RLVEKMSSDN VIALIGQEIF WKTRRTIAHQ QRIFAIQLFE LHRLTQVQKM IARSPDIFFK DNFYLHQPSI KFSSLKNLAC
301: DDVLEPPVVE QKISTKPNNF ELTTDNVYLP LRKDNDKKNI PQQSSQKLNV GTPTSRSFLS DPKLAPRSFQ PPPGYQYLVP IRSPSEGLIY KPYTGPCPPP
401: GGIIAPAYGS CRPVTLSPPI GGDFANVPYS VPTSHKQGAG IFPGPALFDP SCIQPYSMPV IKPSASSSAI EQMNPLSRIR SSEKENSPLM HEVNLVRPHQ
501: KSCNISCQKS AVMSDCDRII QADRGSDMQG STASSPPERV QKGALSLFPV TPTAKGSDQP VQDNDTEQQI QVIKVVPHNP KSASESAARI FRSIQEERKM
601: NY
101: KLNISKSFVS SAPENRCGLV GDLNRCSDSN SESDEDSWIL HKRKAAEDVT NAKHEDASTK RCASIMEGPS CSFLPHGNSH QSPKRAKSSS DCPEDQISGA
201: PDVAGEERSE GISEASSLNS RLVEKMSSDN VIALIGQEIF WKTRRTIAHQ QRIFAIQLFE LHRLTQVQKM IARSPDIFFK DNFYLHQPSI KFSSLKNLAC
301: DDVLEPPVVE QKISTKPNNF ELTTDNVYLP LRKDNDKKNI PQQSSQKLNV GTPTSRSFLS DPKLAPRSFQ PPPGYQYLVP IRSPSEGLIY KPYTGPCPPP
401: GGIIAPAYGS CRPVTLSPPI GGDFANVPYS VPTSHKQGAG IFPGPALFDP SCIQPYSMPV IKPSASSSAI EQMNPLSRIR SSEKENSPLM HEVNLVRPHQ
501: KSCNISCQKS AVMSDCDRII QADRGSDMQG STASSPPERV QKGALSLFPV TPTAKGSDQP VQDNDTEQQI QVIKVVPHNP KSASESAARI FRSIQEERKM
601: NY
001: MGGMKDEAKR ITIPPLFPRV HVNDTGRGGL SQQFDGKTMS LVSSKRPNLP SPTNNISDSL STFSLSLPPP PNNARLIDGP EKNQFSPIYN TKFEGKLNKK
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
Arabidopsis Description
EARLY FLOWERING protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0C8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.