Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03137 | Sorghum | nucleus | 84.49 | 82.23 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 22.73 | 63.84 |
| Os06t0142600-01 | Rice | nucleus | 53.35 | 53.42 |
| Os01t0566100-01 | Rice | nucleus | 24.05 | 46.21 |
| Zm00001d039156_P001 | Maize | nucleus | 38.11 | 44.82 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 18.4 | 37.63 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 19.97 | 37.25 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 19.19 | 36.23 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 25.23 | 36.09 |
| PGSC0003DMT400035914 | Potato | nucleus | 28.38 | 32.93 |
| Solyc08g065870.2.1 | Tomato | nucleus | 27.33 | 32.3 |
| CDY66493 | Canola | nucleus | 23.26 | 32.01 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 30.35 | 31.86 |
| Solyc11g070100.1.1 | Tomato | nucleus | 24.05 | 30.35 |
| CDY11505 | Canola | nucleus | 23.39 | 30.07 |
| PGSC0003DMT400065601 | Potato | nucleus | 25.1 | 29.98 |
| KRH61488 | Soybean | nucleus | 28.12 | 29.97 |
| Bra007774.1-P | Field mustard | nucleus | 23.26 | 29.9 |
| CDY35321 | Canola | nucleus | 23.39 | 29.72 |
| CDX76735 | Canola | nucleus | 22.6 | 29.35 |
| Bra034284.1-P | Field mustard | nucleus | 23.13 | 29.24 |
| KRH05522 | Soybean | nucleus | 26.54 | 28.33 |
| KRH47177 | Soybean | nucleus | 24.84 | 27.84 |
| PGSC0003DMT400075345 | Potato | nucleus | 25.89 | 27.4 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 26.41 | 27.16 |
| Solyc12g095900.1.1 | Tomato | nucleus | 25.76 | 27.15 |
| AT2G25930.1 | Thale cress | nucleus | 24.31 | 26.62 |
| CDY48882 | Canola | nucleus | 16.82 | 26.12 |
| CDY32422 | Canola | nucleus, plastid | 16.82 | 26.07 |
| KRH44225 | Soybean | nucleus | 24.18 | 26.03 |
| KRH15494 | Soybean | nucleus | 13.93 | 25.36 |
| Bra001825.1-P | Field mustard | nucleus | 17.21 | 25.1 |
| CDY56915 | Canola | nucleus | 17.74 | 25.09 |
| Bra023887.1-P | Field mustard | nucleus | 16.95 | 24.9 |
| CDY62750 | Canola | nucleus | 15.9 | 24.74 |
| CDY51450 | Canola | nucleus | 17.21 | 24.44 |
| Bra031274.1-P | Field mustard | nucleus | 17.21 | 24.44 |
| AT3G21320.1 | Thale cress | nucleus | 17.08 | 24.07 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 18.92 | 23.92 |
| PGSC0003DMT400012338 | Potato | nucleus | 20.11 | 23.43 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 24.97 | 23.28 |
Protein Annotations
| EnsemblPlants:Zm00001d044232_P001 | EnsemblPlants:Zm00001d044232_T001 | EnsemblPlantsGene:Zm00001d044232 | EntrezGene:100383534 | GO:GO:0000003 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | PANTHER:PTHR34281:SF5 |
| ProteinID:ONM40521.1 | SEG:seg | UniParc:UPI0008427D3C | UniProt:A0A1D6NJU3 | MapMan:15.5.27 | MapMan:27.1.6.3.2 |
Description
pco135758Protein EARLY FLOWERING 3
Coordinates
chr3:-:222542813..222548835
Molecular Weight (calculated)
82984.2 Da
IEP (calculated)
9.565
GRAVY (calculated)
-0.793
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRGGGGQGG KEEPGKVMGP LFPRLHVSDA GKGGGPRAPP RNKMALYEQF TVPSNRFSSP AASARAAGAS LVPSTAAAQE LDYWYWDHER TLFQPFDVPS
101: NEPPRSSEKF KGNTINGQSN STRREPLRMS SQTKNKDVCA SKSIAKCTSQ HRVGNTIMSS GKKVVSDDEF MVPSICYPRF YRQSTQDHAD KSKPQSTTNP
201: HKSPAMSKSS VECYSTVNKH LDKINEADRR LMNSPKVKEK EAVQGSKAVE VKEKSSSFQA SEKFKDKYAK LCQMRNKASN INHCDNNGCQ PASVNGNFTE
301: AKNPTAARNT SSCKPCTDVD SSNRKSNLLE RSPREVGAKR KRGHHNGEQN DDLSDSSVEC IPGGEISPDE IVAAIGPKHF WKARRAIQNQ QRVFAVQVFE
401: LHKLIKVQKL IAASPHLLIE GDPVLGNALT GKRNKLPKGN SKVQTLSITN KDDIQPTLEQ PELSKQDTEG NLLAHSHDDG LGDNHHNQAA TNETFTSNPP
501: AMHVAPDNKQ NNWCMNPPQN QWLVPVMSPS EGLVYKPFAG PCPPVGNLLT PFYANCAPSR LPSTPYGVPI PHQPQHMVPP GAPAMHMNYF PPFSMPVMNP
601: GTPASAVEQG SHAAAPQPHG HMDQQSLISC NMSHPSGVWR FLASRDSEPQ ASSATSPFDR LQVQGDGSAP LSFFPTASAP NVQPPPSSGG RDRDQQNHVI
701: RVVPRNAQTA SVPKAQPQPS SGGRDQKNHV IRVVPHNAQT ASESAAWIFR SIQMERNQND S
101: NEPPRSSEKF KGNTINGQSN STRREPLRMS SQTKNKDVCA SKSIAKCTSQ HRVGNTIMSS GKKVVSDDEF MVPSICYPRF YRQSTQDHAD KSKPQSTTNP
201: HKSPAMSKSS VECYSTVNKH LDKINEADRR LMNSPKVKEK EAVQGSKAVE VKEKSSSFQA SEKFKDKYAK LCQMRNKASN INHCDNNGCQ PASVNGNFTE
301: AKNPTAARNT SSCKPCTDVD SSNRKSNLLE RSPREVGAKR KRGHHNGEQN DDLSDSSVEC IPGGEISPDE IVAAIGPKHF WKARRAIQNQ QRVFAVQVFE
401: LHKLIKVQKL IAASPHLLIE GDPVLGNALT GKRNKLPKGN SKVQTLSITN KDDIQPTLEQ PELSKQDTEG NLLAHSHDDG LGDNHHNQAA TNETFTSNPP
501: AMHVAPDNKQ NNWCMNPPQN QWLVPVMSPS EGLVYKPFAG PCPPVGNLLT PFYANCAPSR LPSTPYGVPI PHQPQHMVPP GAPAMHMNYF PPFSMPVMNP
601: GTPASAVEQG SHAAAPQPHG HMDQQSLISC NMSHPSGVWR FLASRDSEPQ ASSATSPFDR LQVQGDGSAP LSFFPTASAP NVQPPPSSGG RDRDQQNHVI
701: RVVPRNAQTA SVPKAQPQPS SGGRDQKNHV IRVVPHNAQT ASESAAWIFR SIQMERNQND S
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.