Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P05150_001 | Banana | nucleus | 89.25 | 82.38 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 24.73 | 33.95 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 30.38 | 27.7 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 38.17 | 26.69 |
| CDY32422 | Canola | nucleus, plastid | 33.33 | 25.25 |
| CDY48882 | Canola | nucleus | 32.8 | 24.9 |
| Bra023887.1-P | Field mustard | nucleus | 33.33 | 23.94 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 46.51 | 23.86 |
| CDY62750 | Canola | nucleus | 30.91 | 23.52 |
| CDY56915 | Canola | nucleus | 33.87 | 23.42 |
| Bra001825.1-P | Field mustard | nucleus | 32.8 | 23.37 |
| Solyc08g065870.2.1 | Tomato | nucleus | 40.05 | 23.14 |
| Bra031274.1-P | Field mustard | nucleus | 33.33 | 23.13 |
| CDY51450 | Canola | nucleus | 33.33 | 23.13 |
| Solyc11g070100.1.1 | Tomato | nucleus | 37.37 | 23.05 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 37.1 | 22.92 |
| AT3G21320.1 | Thale cress | nucleus | 32.8 | 22.59 |
| PGSC0003DMT400035914 | Potato | nucleus | 39.52 | 22.41 |
| PGSC0003DMT400065601 | Potato | nucleus | 37.37 | 21.82 |
| KRH61488 | Soybean | nucleus | 40.59 | 21.15 |
| PGSC0003DMT400012338 | Potato | nucleus | 36.56 | 20.83 |
| Zm00001d039156_P001 | Maize | nucleus | 36.02 | 20.71 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 41.13 | 20.68 |
| PGSC0003DMT400075345 | Potato | nucleus | 39.52 | 20.45 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 41.4 | 20.03 |
| OQU78543 | Sorghum | nucleus | 40.05 | 20.0 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 43.82 | 19.98 |
| Solyc12g095900.1.1 | Tomato | nucleus | 38.71 | 19.94 |
| CDY66493 | Canola | nucleus | 29.57 | 19.89 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 40.86 | 19.82 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 41.13 | 19.79 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 40.59 | 19.74 |
| KRH05522 | Soybean | nucleus | 37.63 | 19.64 |
| Os06t0142600-01 | Rice | nucleus | 39.78 | 19.47 |
| CDX76735 | Canola | nucleus | 30.38 | 19.28 |
| Bra007774.1-P | Field mustard | nucleus | 30.11 | 18.92 |
| KRH47177 | Soybean | nucleus | 34.41 | 18.85 |
| Bra034284.1-P | Field mustard | nucleus | 30.38 | 18.77 |
| CDY11505 | Canola | nucleus | 29.84 | 18.75 |
| Zm00001d044232_P001 | Maize | nucleus | 37.63 | 18.4 |
| CDY35321 | Canola | nucleus | 29.57 | 18.36 |
| EES03137 | Sorghum | nucleus | 37.9 | 18.03 |
| KRH44225 | Soybean | nucleus | 33.87 | 17.82 |
| AT2G25930.1 | Thale cress | nucleus | 32.53 | 17.41 |
| KRH15494 | Soybean | nucleus | 14.78 | 13.16 |
| Os01t0566100-01 | Rice | nucleus | 7.8 | 7.32 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P33500_001 | EnsemblPlants:GSMUA_Achr6T33500_001 | EnsemblPlantsGene:GSMUA_Achr6G33500_001 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | UniParc:UPI000294A90C | UniProt:M0TCE3 |
| MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : | : | : |
Description
Putative Protein EARLY FLOWERING 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G33500_001]
Coordinates
chr6:-:32518366..32522186
Molecular Weight (calculated)
40484.2 Da
IEP (calculated)
9.741
GRAVY (calculated)
-0.562
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTRRQLCYK ALPGKGHRAT DISGNCHKED SAKKNGLLEF RDLERKDDAS EPLIVGTVSG LVISPDDIVG VIGSKHFWKA RRAIINQQKD FAIQVFELHR
101: VIKVQKLISA SPHLLLEGNP YLSKCSVKPP NKTLPRCNTN PRPEEFRPKD GLQNPKKNKE QPADNIAGVS ALPACEDGLL CFPPLGNQWL VPVMLPSEGL
201: VYKPYTGPCP PTGGFMAPLY GRGTPLGASQ VAGDFINPAF GVSASHQPPN LAGSQPNGQT GQHSRRSCNM SPIPRKEAFP GHVGKFQVSK NSEFQGSTVN
301: SPSEKAQLEE RDQFLLFPTA PGASSLNCSL QSNGTDSQTR VIKVVPHNSR SATESAARIF RSIQEGRQQH DS
101: VIKVQKLISA SPHLLLEGNP YLSKCSVKPP NKTLPRCNTN PRPEEFRPKD GLQNPKKNKE QPADNIAGVS ALPACEDGLL CFPPLGNQWL VPVMLPSEGL
201: VYKPYTGPCP PTGGFMAPLY GRGTPLGASQ VAGDFINPAF GVSASHQPPN LAGSQPNGQT GQHSRRSCNM SPIPRKEAFP GHVGKFQVSK NSEFQGSTVN
301: SPSEKAQLEE RDQFLLFPTA PGASSLNCSL QSNGTDSQTR VIKVVPHNSR SATESAARIF RSIQEGRQQH DS
001: MGGMKDEAKR ITIPPLFPRV HVNDTGRGGL SQQFDGKTMS LVSSKRPNLP SPTNNISDSL STFSLSLPPP PNNARLIDGP EKNQFSPIYN TKFEGKLNKK
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
Arabidopsis Description
EARLY FLOWERING protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0C8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.