Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065601 | Potato | nucleus | 77.45 | 73.31 |
| Solyc08g065870.2.1 | Tomato | nucleus | 48.59 | 45.5 |
| Solyc12g095900.1.1 | Tomato | nucleus | 49.25 | 41.14 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 47.1 | 39.17 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 23.05 | 37.37 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 24.54 | 36.27 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 24.21 | 36.23 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 31.01 | 35.15 |
| KRH61488 | Soybean | nucleus | 41.46 | 35.01 |
| KRH05522 | Soybean | nucleus | 38.64 | 32.68 |
| Bra007774.1-P | Field mustard | nucleus | 31.34 | 31.93 |
| CDY66493 | Canola | nucleus | 29.19 | 31.83 |
| CDX76735 | Canola | nucleus | 30.85 | 31.74 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 14.26 | 31.73 |
| CDY11505 | Canola | nucleus | 31.01 | 31.59 |
| CDY35321 | Canola | nucleus | 30.85 | 31.05 |
| AT2G25930.1 | Thale cress | nucleus | 35.49 | 30.79 |
| Bra034284.1-P | Field mustard | nucleus | 30.35 | 30.4 |
| KRH15494 | Soybean | nucleus | 20.4 | 29.43 |
| OQU78543 | Sorghum | nucleus | 33.33 | 26.98 |
| Zm00001d039156_P001 | Maize | nucleus | 28.86 | 26.89 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 32.34 | 25.23 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 32.01 | 25.1 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 31.84 | 25.03 |
| Os06t0142600-01 | Rice | nucleus | 31.51 | 25.0 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 31.34 | 24.71 |
| Zm00001d044232_P001 | Maize | nucleus | 30.35 | 24.05 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 23.88 | 23.92 |
| EES03137 | Sorghum | nucleus | 29.68 | 22.89 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 27.53 | 20.34 |
| Os01t0566100-01 | Rice | nucleus | 11.77 | 17.93 |
Protein Annotations
| EnsemblPlants:Solyc11g070100.1.1 | EnsemblPlantsGene:Solyc11g070100.1 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | UniParc:UPI0002769551 | UniProt:K4DAG6 | MapMan:15.5.27 |
| MapMan:27.1.6.3.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:54634568..54639038
Molecular Weight (calculated)
66718.4 Da
IEP (calculated)
9.080
GRAVY (calculated)
-0.776
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGTGEEKV MGPMFPRLNV NDTEKGGPRA PPRNKMALYE QLSIPSQRYN PGDLPHNSSN SANLVLPHPS QENEHERGVL FSRQLPALRH PVEKPYGRSS
101: GSNTPLREVK SKRQTEKEDF RVPTFDNSKE RAVNTEDYSK GTSDIDKRDS TLKRTDQLSH VTPRENLVNT FGESHKTNIV QLEFRSDCQV DCTVFSGSVI
201: DVDNDSQEDK TCKSSQTGEM AHSDELSETS MVEYVSEMDI SPDNVVRMIG QKHFWKARRA IANQQRTLAL QVFELHRLLK VQKLIAGSPN LNLEDNAYLG
301: KPLKRLSAKR VCLEHSVKAP EIVSRPKNDS EKPKGRMECN AENDVGKTSL SSVRQPSSCN PLSEKQLPTP VKHDSLMSPW YFNQPPGHQW LIPMMSPSEG
401: LVYKPHSGPA VMSPVYGGCG PPGSTPMTGN FLASAYGLPF APPTGHGYFR PFGMPVTNPA IPSPTQNQSN QVVASHSKGQ LSGGRASFNI QHPNSSNVGS
501: ESDGTLPEVV RLYPSRDSEL HASTAGSPSE ITRAVDMGNS TRGRSAFHHF PTSPAVDNPI LRPQPHFPER PARAIKAIPH NARSATESVA RIFQSIQEER
601: KQY
101: GSNTPLREVK SKRQTEKEDF RVPTFDNSKE RAVNTEDYSK GTSDIDKRDS TLKRTDQLSH VTPRENLVNT FGESHKTNIV QLEFRSDCQV DCTVFSGSVI
201: DVDNDSQEDK TCKSSQTGEM AHSDELSETS MVEYVSEMDI SPDNVVRMIG QKHFWKARRA IANQQRTLAL QVFELHRLLK VQKLIAGSPN LNLEDNAYLG
301: KPLKRLSAKR VCLEHSVKAP EIVSRPKNDS EKPKGRMECN AENDVGKTSL SSVRQPSSCN PLSEKQLPTP VKHDSLMSPW YFNQPPGHQW LIPMMSPSEG
401: LVYKPHSGPA VMSPVYGGCG PPGSTPMTGN FLASAYGLPF APPTGHGYFR PFGMPVTNPA IPSPTQNQSN QVVASHSKGQ LSGGRASFNI QHPNSSNVGS
501: ESDGTLPEVV RLYPSRDSEL HASTAGSPSE ITRAVDMGNS TRGRSAFHHF PTSPAVDNPI LRPQPHFPER PARAIKAIPH NARSATESVA RIFQSIQEER
601: KQY
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.