Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035914 | Potato | nucleus | 89.44 | 87.8 |
| Solyc11g070100.1.1 | Tomato | nucleus | 45.5 | 48.59 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 48.45 | 43.03 |
| Solyc12g095900.1.1 | Tomato | nucleus | 47.05 | 41.97 |
| KRH61488 | Soybean | nucleus | 44.41 | 40.06 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 23.14 | 40.05 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 23.91 | 37.75 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 30.9 | 37.41 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 22.98 | 36.72 |
| Bra007774.1-P | Field mustard | nucleus | 33.23 | 36.15 |
| KRH05522 | Soybean | nucleus | 39.91 | 36.04 |
| CDY66493 | Canola | nucleus | 30.59 | 35.62 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 14.91 | 35.42 |
| CDX76735 | Canola | nucleus | 32.14 | 35.32 |
| CDY11505 | Canola | nucleus | 32.45 | 35.3 |
| CDY35321 | Canola | nucleus | 30.9 | 33.22 |
| AT2G25930.1 | Thale cress | nucleus | 35.4 | 32.81 |
| Bra034284.1-P | Field mustard | nucleus | 30.43 | 32.56 |
| KRH15494 | Soybean | nucleus | 20.19 | 31.1 |
| OQU78543 | Sorghum | nucleus | 34.94 | 30.2 |
| Zm00001d039156_P001 | Maize | nucleus | 30.28 | 30.14 |
| Os06t0142600-01 | Rice | nucleus | 34.32 | 29.08 |
| Zm00001d044232_P001 | Maize | nucleus | 32.3 | 27.33 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 32.61 | 27.17 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 32.14 | 27.06 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 32.3 | 27.05 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 25.0 | 26.74 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 31.83 | 26.73 |
| EES03137 | Sorghum | nucleus | 31.99 | 26.34 |
| Os01t0566100-01 | Rice | nucleus | 13.82 | 22.47 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 27.17 | 21.45 |
Protein Annotations
| EnsemblPlants:Solyc08g065870.2.1 | EnsemblPlantsGene:Solyc08g065870.2 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | SEG:seg | UniParc:UPI000276B8A3 | UniProt:K4CLG6 |
| MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:54210758..54215926
Molecular Weight (calculated)
70663.0 Da
IEP (calculated)
8.683
GRAVY (calculated)
-0.744
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGKGEEKV MGPMFPRLHV NDTDKGGPRA PPRNKMALYE QLSIPSQRFN SGVLPLDPNN TSKMAPPSSS QGSGHDRSGY LPIQHPPSRR LADKPPGHSS
101: DPSTLLQQYE LKKRTEEDDF TVPIFVNSKL GQAHGSHNVN MEKLSPSGQL FCPNKELEGV THLTLRQQRN SQNKENLKCT LARREKTTSN SASKECRLDP
201: QVGCSSIPEP VKGTYDGSSY PRKEFVSEEQ LTANDLVNDT ESQEDRAHKS LQTGNLDRGD DLSETSRVES ISGTDISPDD IVGIIGLKRF WKARRAIVNQ
301: QRVFAIQVFE LHRLIKVQRL IAGSPNSSLE DPAYLGKPLK SSSIKRLPLD CIVRESQSVL KRKHDSEKPH FRMEHTAESN VGKASLSTVQ NGSQLSSHKP
401: FSGTPLPTPV TNDSNAGPWC FQQPPGHQWL IPVMSPSEGL VYKPFPGPGF TSPICGSGPP GSSPTMGNFF APTYGVPAPN PHYQGMGVPF APPTGHGYFR
501: QYGMPAMNPP ISSTASEESN QYTMPGLQHQ FSGVVDDVNI QHQDSSNVLN QKKENVPDVV RYQSTKDNEV QASSASSPIE TAGRNMLSLF PTSPVTDNRD
601: GSPQACVPDN PARVIKVVPH NARSATESVA RIFQSIQQER NNMT
101: DPSTLLQQYE LKKRTEEDDF TVPIFVNSKL GQAHGSHNVN MEKLSPSGQL FCPNKELEGV THLTLRQQRN SQNKENLKCT LARREKTTSN SASKECRLDP
201: QVGCSSIPEP VKGTYDGSSY PRKEFVSEEQ LTANDLVNDT ESQEDRAHKS LQTGNLDRGD DLSETSRVES ISGTDISPDD IVGIIGLKRF WKARRAIVNQ
301: QRVFAIQVFE LHRLIKVQRL IAGSPNSSLE DPAYLGKPLK SSSIKRLPLD CIVRESQSVL KRKHDSEKPH FRMEHTAESN VGKASLSTVQ NGSQLSSHKP
401: FSGTPLPTPV TNDSNAGPWC FQQPPGHQWL IPVMSPSEGL VYKPFPGPGF TSPICGSGPP GSSPTMGNFF APTYGVPAPN PHYQGMGVPF APPTGHGYFR
501: QYGMPAMNPP ISSTASEESN QYTMPGLQHQ FSGVVDDVNI QHQDSSNVLN QKKENVPDVV RYQSTKDNEV QASSASSPIE TAGRNMLSLF PTSPVTDNRD
601: GSPQACVPDN PARVIKVVPH NARSATESVA RIFQSIQQER NNMT
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.