Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G477400.1 | Wheat | nucleus | 87.32 | 86.87 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 87.06 | 86.83 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 85.49 | 84.61 |
| OQU78543 | Sorghum | nucleus | 58.43 | 60.0 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 20.91 | 59.04 |
| Zm00001d039156_P001 | Maize | nucleus | 45.23 | 53.48 |
| Os06t0142600-01 | Rice | nucleus | 49.41 | 49.74 |
| Os01t0566100-01 | Rice | nucleus | 22.35 | 43.18 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 21.44 | 40.69 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 19.74 | 40.59 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 21.18 | 39.71 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 27.58 | 39.66 |
| VIT_04s0008g00660.t01 | Wine grape | nucleus | 31.9 | 33.66 |
| PGSC0003DMT400035914 | Potato | nucleus | 27.58 | 32.16 |
| Solyc08g065870.2.1 | Tomato | nucleus | 27.06 | 32.14 |
| CDY66493 | Canola | nucleus | 22.88 | 31.65 |
| PGSC0003DMT400065601 | Potato | nucleus | 26.27 | 31.55 |
| Solyc11g070100.1.1 | Tomato | nucleus | 24.71 | 31.34 |
| CDY11505 | Canola | nucleus | 23.79 | 30.74 |
| CDX76735 | Canola | nucleus | 23.53 | 30.72 |
| Bra007774.1-P | Field mustard | nucleus | 23.53 | 30.41 |
| KRH61488 | Soybean | nucleus | 28.37 | 30.39 |
| KRH05522 | Soybean | nucleus | 27.97 | 30.01 |
| Bra034284.1-P | Field mustard | nucleus | 23.53 | 29.9 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 28.63 | 29.59 |
| CDY35321 | Canola | nucleus | 23.14 | 29.55 |
| KRH47177 | Soybean | nucleus | 25.62 | 28.87 |
| PGSC0003DMT400075345 | Potato | nucleus | 26.93 | 28.65 |
| Solyc12g095900.1.1 | Tomato | nucleus | 26.54 | 28.12 |
| CDY32422 | Canola | nucleus, plastid | 17.39 | 27.09 |
| KRH44225 | Soybean | nucleus | 24.84 | 26.87 |
| Bra001825.1-P | Field mustard | nucleus | 17.91 | 26.25 |
| CDY48882 | Canola | nucleus | 16.73 | 26.12 |
| KRH15494 | Soybean | nucleus | 14.25 | 26.08 |
| AT2G25930.1 | Thale cress | nucleus | 23.53 | 25.9 |
| CDY56915 | Canola | nucleus | 18.17 | 25.84 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 20.13 | 25.58 |
| PGSC0003DMT400012338 | Potato | nucleus | 21.83 | 25.57 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 26.93 | 25.25 |
| CDY51450 | Canola | nucleus | 17.65 | 25.19 |
| Bra031274.1-P | Field mustard | nucleus | 17.65 | 25.19 |
| CDY62750 | Canola | nucleus | 15.82 | 24.74 |
| Bra023887.1-P | Field mustard | nucleus | 16.73 | 24.71 |
| AT3G21320.1 | Thale cress | nucleus | 17.39 | 24.63 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G094980.4 | EnsemblPlantsGene:HORVU1Hr1G094980 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | PANTHER:PTHR34281:SF5 | SEG:seg | UniParc:UPI000B4894B9 |
| UniProt:A0A287GTY5 | MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:556900467..556904844
Molecular Weight (calculated)
81309.1 Da
IEP (calculated)
9.378
GRAVY (calculated)
-0.725
Length
765 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRAGGGGGG GSGEDKVMGP LFPRLHVNDT TLKGGGPRAP PRNKMALYEQ FSVPSQRFAA NTAPAAHRPA ASFAAVSSAS AGQIGGIDRP LFPSFCVPSN
101: EPVPLPQHIN TNSSGHATSG RLSTQLKSKD AYAAGSTAEC TSSHGRDNNA KNSSGNKLTN DDDFTVPSVF CSGVRPRSNH EEARIQENST HLPATSPYKS
201: GPTVSKPTAK FPNTDKRYLE GRNPSDTRSR DSPNIIRDKA PANTTTNFLE AEERTSSFQF SADKTMGKRD DKGSSYRDKP SSINVSDKQQ SRNEGHQART
301: RNENAAESQN APKAGNGPYS TDIACNGASN LSEKGLRETG EKRKRSTGHH DVQRDDSSDS SVESLPELEI SPDDVVGAIG PKHFWKARRA IVNQQRVFAV
401: QVFELHRLIK VQKLIAASPH LLIEGDPCLG SALVTSKKKT AAANVEKQLL SAKSKDDDDA QLTLQQVEYS KDNTEGNQAS PSQDNDLVEV RHENQAASNG
501: AVSSNPPAMP APTDNKQNNW CAPPPQNQWL VPVMSPSEGL VYKPYTGPCP PAGSFLAPFY ASCAPLSLPS TAGEFMNSPY GIPMPHQPQH MGVGGPPAMP
601: PMYFPPFSVP VMNPVVSSSA VEQVSRVAAA RPNTHLEHHS RSSCNMRNEA VSVGGVWRFH SSRGSKLQGS SAASSPFDRQ QGQGEARGHA AAAPAAPPPT
701: SSSAGNGNGN AAQQPQVSSG SQENPVAAAA AARVIRVVPH TARTASESAA RIFRSIQMER QQNGP
101: EPVPLPQHIN TNSSGHATSG RLSTQLKSKD AYAAGSTAEC TSSHGRDNNA KNSSGNKLTN DDDFTVPSVF CSGVRPRSNH EEARIQENST HLPATSPYKS
201: GPTVSKPTAK FPNTDKRYLE GRNPSDTRSR DSPNIIRDKA PANTTTNFLE AEERTSSFQF SADKTMGKRD DKGSSYRDKP SSINVSDKQQ SRNEGHQART
301: RNENAAESQN APKAGNGPYS TDIACNGASN LSEKGLRETG EKRKRSTGHH DVQRDDSSDS SVESLPELEI SPDDVVGAIG PKHFWKARRA IVNQQRVFAV
401: QVFELHRLIK VQKLIAASPH LLIEGDPCLG SALVTSKKKT AAANVEKQLL SAKSKDDDDA QLTLQQVEYS KDNTEGNQAS PSQDNDLVEV RHENQAASNG
501: AVSSNPPAMP APTDNKQNNW CAPPPQNQWL VPVMSPSEGL VYKPYTGPCP PAGSFLAPFY ASCAPLSLPS TAGEFMNSPY GIPMPHQPQH MGVGGPPAMP
601: PMYFPPFSVP VMNPVVSSSA VEQVSRVAAA RPNTHLEHHS RSSCNMRNEA VSVGGVWRFH SSRGSKLQGS SAASSPFDRQ QGQGEARGHA AAAPAAPPPT
701: SSSAGNGNGN AAQQPQVSSG SQENPVAAAA AARVIRVVPH TARTASESAA RIFRSIQMER QQNGP
001: MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
101: QMSFMENVRS SAQHDQRKMV REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL ATCSKPEVRD QVKANARSGG
201: FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD
301: DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP
401: HVVVKQRGDS EKTDQHKMES SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE GLIYKPHPGM AHTGHYGGYY
501: GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS
601: TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP
Arabidopsis Description
ELF3Protein EARLY FLOWERING 3 [Source:UniProtKB/Swiss-Prot;Acc:O82804]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.