Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031274.1-P | Field mustard | nucleus | 99.81 | 99.81 |
| CDY56915 | Canola | nucleus | 93.66 | 93.31 |
| CDY62750 | Canola | nucleus | 67.16 | 73.62 |
| CDY48882 | Canola | nucleus | 64.55 | 70.61 |
| CDY32422 | Canola | nucleus, plastid | 61.19 | 66.8 |
| AT3G21320.1 | Thale cress | nucleus | 66.79 | 66.3 |
| GSMUA_Achr6P33500_001 | Banana | mitochondrion | 23.13 | 33.33 |
| GSMUA_Achr1P05150_001 | Banana | nucleus | 23.51 | 31.27 |
| Os01t0566050-00 | Rice | cytosol, nucleus | 14.18 | 28.04 |
| Solyc06g062480.2.1 | Tomato | plasma membrane | 26.49 | 23.59 |
| GSMUA_Achr1P14390_001 | Banana | nucleus | 22.95 | 23.12 |
| GSMUA_Achr2P08490_001 | Banana | nucleus | 17.35 | 22.79 |
| CDY66493 | Canola | nucleus | 22.39 | 21.7 |
| PGSC0003DMT400012338 | Potato | nucleus | 26.12 | 21.44 |
| KRH47177 | Soybean | nucleus | 26.68 | 21.06 |
| KRH44225 | Soybean | nucleus | 27.05 | 20.51 |
| Zm00001d039156_P001 | Maize | nucleus | 24.63 | 20.4 |
| VIT_09s0002g02680.t01 | Wine grape | nucleus | 27.99 | 20.27 |
| CDX76735 | Canola | nucleus | 21.64 | 19.8 |
| CDY11505 | Canola | nucleus | 21.46 | 19.43 |
| CDY35321 | Canola | nucleus | 21.64 | 19.37 |
| Os06t0142600-01 | Rice | nucleus | 25.93 | 18.29 |
| OQU78543 | Sorghum | nucleus | 25.19 | 18.12 |
| HORVU1Hr1G094980.4 | Barley | nucleus | 25.19 | 17.65 |
| Zm00001d044232_P001 | Maize | nucleus | 24.44 | 17.21 |
| TraesCS1D01G451200.2 | Wheat | nucleus | 24.63 | 17.21 |
| TraesCS1B01G477400.1 | Wheat | nucleus | 24.63 | 17.17 |
| TraesCS1A01G443200.2 | Wheat | nucleus | 24.63 | 17.08 |
| EES03137 | Sorghum | nucleus | 24.81 | 17.01 |
| GSMUA_Achr5P09620_001 | Banana | unclear | 23.88 | 15.69 |
| Os01t0566100-01 | Rice | nucleus | 7.84 | 10.61 |
Protein Annotations
| EnsemblPlants:CDY51450 | EnsemblPlantsGene:GSBRNA2T00003491001 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:2000028 | PANTHER:PTHR34281 | ProteinID:CDY51450 | ProteinID:CDY51450.1 | SEG:seg |
| UniParc:UPI0004EDC8FA | UniProt:A0A078IK82 | MapMan:15.5.27 | MapMan:27.1.6.3.2 | : | : |
Description
BnaA05g36670DBnaA05g36670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK82]
Coordinates
chrLK032996:+:52970..55070
Molecular Weight (calculated)
59738.1 Da
IEP (calculated)
10.216
GRAVY (calculated)
-0.688
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGMKDEANR ITIPPLFPRV HVNDTGRGGL PQPFDGKSKR YPLPSPTNKI CDSPSTLSLS LAPQANNTRR HGRPEKSQFT QICNTSPASK FEGKVNHPSA
101: RGSSVTNTKP SSIIQNEYHF KNLTNLDSLK APLVRRSETN PQANTDLSLQ FCTSSSSIAG GGGEAAGSKV ALDNLQIREL LLQDESKNRS LNMMKTQLYR
201: RRAVDVSNVE TQKKLKTVPP REQDVLDRSA IDSLSGMSAS SNDVARVIGD KMFWKMRTYM INQQKIFAAQ VFELHRLIMV QKMVAKSPNL VLESKLNGLR
301: SGSMVASKVK KPNTENHKPV TEEYPEHMKP KLPLPAITKE LMKPIWQQQL LPPPGNQWLV PVMSPSEGLV YKPYAGPCPP PPSAFMVPIY GQDSLDTSAF
401: KFPVSTQFSH NYFPQPNART TVLDQTNPFG QLQRWSSTSS HMTQAIPFSL KKSQESNDSD VHGSTASSPP EKHKFDVLPL FPTEPTHHND EHEQKQQPLH
501: RAIKAIPHNS TSASESAARI FRSIQEERRD SDHMIR
101: RGSSVTNTKP SSIIQNEYHF KNLTNLDSLK APLVRRSETN PQANTDLSLQ FCTSSSSIAG GGGEAAGSKV ALDNLQIREL LLQDESKNRS LNMMKTQLYR
201: RRAVDVSNVE TQKKLKTVPP REQDVLDRSA IDSLSGMSAS SNDVARVIGD KMFWKMRTYM INQQKIFAAQ VFELHRLIMV QKMVAKSPNL VLESKLNGLR
301: SGSMVASKVK KPNTENHKPV TEEYPEHMKP KLPLPAITKE LMKPIWQQQL LPPPGNQWLV PVMSPSEGLV YKPYAGPCPP PPSAFMVPIY GQDSLDTSAF
401: KFPVSTQFSH NYFPQPNART TVLDQTNPFG QLQRWSSTSS HMTQAIPFSL KKSQESNDSD VHGSTASSPP EKHKFDVLPL FPTEPTHHND EHEQKQQPLH
501: RAIKAIPHNS TSASESAARI FRSIQEERRD SDHMIR
001: MGGMKDEAKR ITIPPLFPRV HVNDTGRGGL SQQFDGKTMS LVSSKRPNLP SPTNNISDSL STFSLSLPPP PNNARLIDGP EKNQFSPIYN TKFEGKLNKK
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
101: GINYTSPKGS SVTNTKPSSI KQNEYLKNLT SLDSIKSPIV IHSEIDPQAN TDLSLQFCTS GSSKPGGEAV VGSKILLSER LEDENQNGSP NVMKTQSYRR
201: NFAEFNNETQ KKPKTLPRRE QVASNCSAIE SLSGISASSY DIARVIGEKR FWKMRTYMIN QQKIFAGQVF ELHRLIMVQK MVAKSPNLFL ESKLNGVKHG
301: TMRSSHQLAM AASKVRKPNT ENHKPVPEEY PEHMKPKLPL PSISKELVTP IWPQQLLPPP GNQWLVPVIT DSDGLVYKPF PGPCPPSSSA FMVPVYGQDS
401: LETPFRFPVS SPFSHSYFPP PNARTTVDQT NPFGQFQRWS NTSSHMTQAI PFSLKKSQES NDSDIHGSTA SSPPEKHKLE VLPLFPTEPT HQTDEYKQKQ
501: QPMLRAIKAV PHNSTSASES AARIFRFIQE ERRDSDHMIS
Arabidopsis Description
EARLY FLOWERING protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0C8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.