Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G377300.1 | Wheat | plasma membrane, plastid | 93.39 | 93.39 |
| TraesCS7A01G381000.1 | Wheat | plastid | 92.95 | 92.14 |
| EER88631 | Sorghum | plastid | 80.62 | 81.33 |
| Os06t0608600-01 | Rice | plasma membrane | 81.5 | 80.09 |
| VIT_19s0015g01110.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 67.84 | 66.38 |
| AT4G26550.1 | Thale cress | plasma membrane | 65.64 | 66.22 |
| CDX94317 | Canola | cytosol, peroxisome, plasma membrane | 65.64 | 65.93 |
| KRG98435 | Soybean | plasma membrane | 63.88 | 65.91 |
| KRH46429 | Soybean | plasma membrane | 63.88 | 65.91 |
| Bra026423.1-P | Field mustard | plasma membrane | 65.2 | 65.49 |
| CDX89326 | Canola | cytosol, peroxisome, plasma membrane | 65.2 | 65.49 |
| CDY42730 | Canola | plasma membrane | 65.2 | 63.52 |
| CDX92816 | Canola | plasma membrane | 64.76 | 63.36 |
| GSMUA_Achr3P04250_001 | Banana | plasma membrane | 63.44 | 62.61 |
| TraesCS7B01G126600.1 | Wheat | plasma membrane, plastid | 62.56 | 62.56 |
| AT5G56020.1 | Thale cress | plasma membrane | 62.56 | 61.74 |
| PGSC0003DMT400057335 | Potato | plasma membrane | 62.56 | 60.94 |
| Solyc07g065850.2.1 | Tomato | plasma membrane | 62.11 | 60.52 |
| CDY06543 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.31 | 41.89 |
| Bra019100.1-P | Field mustard | cytosol | 59.47 | 29.87 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G282900.1 | EnsemblPlantsGene:TraesCS7B01G282900 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 | PANTHER:PTHR23137 | PANTHER:PTHR23137:SF10 |
| PFAM:PF04178 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7B:+:517306828..517309367
Molecular Weight (calculated)
22829.0 Da
IEP (calculated)
9.154
GRAVY (calculated)
0.631
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAWFSGSGP SPSSSAASSQ PPPSLLAEWN SYAAARSAEE DVGGGFGIDI EAAXXXXXXX XXXXXXXVSK GVRGFPGSFQ SSTSSVPSGK SLMYFGLFLA
101: SGIFLVFIAF TIFLPVMVIM PQKFAICFTM GCAFIIGSFF ALKGPKNQLY HMISRERLPF TIGFVGSMFA TIYVSMVLHS YILSVFFSCL QILALVYYAI
201: SYFPGGSAGM KFLSSTLVAS VLRCFGR
101: SGIFLVFIAF TIFLPVMVIM PQKFAICFTM GCAFIIGSFF ALKGPKNQLY HMISRERLPF TIGFVGSMFA TIYVSMVLHS YILSVFFSCL QILALVYYAI
201: SYFPGGSAGM KFLSSTLVAS VLRCFGR
001: MDLEVSKGVR DIPGSLQSAT SSMPSGKALM YFGLLLASGV FFIFIAFTMF LPVMVLMPQK FAICFTLGCG FIIGSFFALR GPKNQLAHMS SMERLPSTLG
101: FIATMVGTIY VSMVLHSYIL SVLFSVLQVL ALVYYCISYF PGGSSGMRFL SSALTSSALR VFGR
101: FIATMVGTIY VSMVLHSYIL SVLFSVLQVL ALVYYCISYF PGGSSGMRFL SSALTSSALR VFGR
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:A0A178UYE8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.