Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001696.1-P | Field mustard | nucleus | 99.51 | 99.51 |
| CDX75957 | Canola | nucleus | 49.84 | 50.0 |
| CDY04096 | Canola | nucleus | 7.93 | 29.88 |
| CDY18486 | Canola | nucleus | 22.49 | 29.32 |
| CDX95560 | Canola | plastid | 23.14 | 29.07 |
| CDY17659 | Canola | nucleus | 9.55 | 28.78 |
| KRG88430 | Soybean | nucleus | 10.84 | 27.92 |
| CDY36240 | Canola | nucleus | 9.22 | 27.67 |
| CDX93685 | Canola | nucleus | 18.12 | 27.32 |
| KRH72147 | Soybean | cytosol | 6.8 | 27.27 |
| CDY09431 | Canola | cytosol | 5.02 | 27.19 |
| CDX92189 | Canola | nucleus | 18.61 | 26.87 |
| AT3G18035.1 | Thale cress | nucleus | 20.71 | 26.67 |
| CDY40600 | Canola | nucleus | 19.09 | 26.52 |
| VIT_17s0000g02550.t01 | Wine grape | nucleus | 14.4 | 25.07 |
| CDY04315 | Canola | nucleus, plastid | 18.28 | 25.0 |
| KRG94697 | Soybean | cytosol | 7.28 | 25.0 |
| CDY48812 | Canola | cytosol | 5.34 | 25.0 |
| CDX95791 | Canola | nucleus | 12.78 | 24.38 |
| CDX95794 | Canola | nucleus | 16.34 | 23.88 |
| KRH60528 | Soybean | nucleus | 14.72 | 23.76 |
| CDX92188 | Canola | nucleus | 18.45 | 22.75 |
| CDY67892 | Canola | nucleus | 10.52 | 22.26 |
| KRH41804 | Soybean | nucleus | 13.75 | 20.58 |
| CDY09432 | Canola | nucleus | 6.31 | 20.31 |
| KRH39095 | Soybean | nucleus | 16.02 | 19.92 |
| CDY59682 | Canola | nucleus, plastid | 19.09 | 19.63 |
| PGSC0003DMT400014700 | Potato | extracellular, nucleus | 15.37 | 18.03 |
| Solyc03g119130.2.1 | Tomato | nucleus | 14.72 | 17.57 |
| CDY48811 | Canola | mitochondrion, nucleus | 6.63 | 16.67 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:35.2 | GO:A0A078ILG3 | UniProt:A0A078ILG3 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlants:CDY51930 |
| ProteinID:CDY51930 | ProteinID:CDY51930.1 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006334 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00004518001 | InterPro:HMGA_plant | InterPro:Histone_H1/H5_H15 |
| InterPro:IPR005818 | InterPro:IPR036388 | PFAM:PF00538 | PRINTS:PR00929 | PFscan:PS51504 | PANTHER:PTHR11467 |
| PANTHER:PTHR11467:SF29 | SMART:SM00526 | SUPFAM:SSF46785 | UniParc:UPI0004EEB0CB | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng11070DBnaAnng11070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILG3]
Coordinates
chrLK033040:-:45554..48005
Molecular Weight (calculated)
65717.0 Da
IEP (calculated)
4.392
GRAVY (calculated)
-0.496
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSDSHQPF DVTTIASTYV PESATAPNAQ TVNESNRVET QVAPVVEPGV EPVVQPQGEP DAASEAALVP AQPSSNPRPY TDMIYDAVVA LNEPEGSSKW
101: AISTYVRRLM NPNCPDGHEA LMTHHLEVMK KSGILTMVKK SYKLAVSSPP GNVAAAGAVA SGSEIPPTYT GSLDMVVASG WEIPRTYTGP LDMVVASGSE
201: IPPTNTSSLD MLAVTASGSA SQPLKRGRGR PPKPKTEAPQ QQQPIDARPI SQAVQPSTNV EPSAVQPSGE QPELPVANPS PVVTEPAKRG PGRPRKDGSG
301: PSVPASNLAV TMKRRGWPMS CRASGRERKP ISVPPPDSML PVATLAPAGE AMAVAAVMKR GPGRPPKRGR GRTAGRPIQD TPRLVTRATA NIQEADYGEL
401: KRRLGLASEK VKEILNVLEA GIAGDKQAVA QAAQELEGLI LMMQPEEAAP PQIESETQGM ELGQGSKGGG EQAPIQTMIL AQPNAMEEVQ PEEAAPEIET
501: EAQGMELGQG SEGGGEQAQI QTLILTQPQP QTLTQPRPQT PPQLQPETLT LTEPEPQILR ELEPQTVPEL EPLPELEPLL ELEPLIDLEP LPLTQSQPQI
601: LPQIEPNTEA EAMDEDIF
101: AISTYVRRLM NPNCPDGHEA LMTHHLEVMK KSGILTMVKK SYKLAVSSPP GNVAAAGAVA SGSEIPPTYT GSLDMVVASG WEIPRTYTGP LDMVVASGSE
201: IPPTNTSSLD MLAVTASGSA SQPLKRGRGR PPKPKTEAPQ QQQPIDARPI SQAVQPSTNV EPSAVQPSGE QPELPVANPS PVVTEPAKRG PGRPRKDGSG
301: PSVPASNLAV TMKRRGWPMS CRASGRERKP ISVPPPDSML PVATLAPAGE AMAVAAVMKR GPGRPPKRGR GRTAGRPIQD TPRLVTRATA NIQEADYGEL
401: KRRLGLASEK VKEILNVLEA GIAGDKQAVA QAAQELEGLI LMMQPEEAAP PQIESETQGM ELGQGSKGGG EQAPIQTMIL AQPNAMEEVQ PEEAAPEIET
501: EAQGMELGQG SEGGGEQAQI QTLILTQPQP QTLTQPRPQT PPQLQPETLT LTEPEPQILR ELEPQTVPEL EPLPELEPLL ELEPLIDLEP LPLTQSQPQI
601: LPQIEPNTEA EAMDEDIF
001: MDPSLSATND PHHPPPPQFT SFPPFTNTNP FASPNHPFFT GPTAVAPPNN IHLYQAAPPQ QPQTSPVPPH PSISHPPYSD MICTAIAALN EPDGSSKQAI
101: SRYIERIYTG IPTAHGALLT HHLKTLKTSG ILVMVKKSYK LASTPPPPPP TSVAPSLEPP RSDFIVNENQ PLPDPVLASS TPQTIKRGRG RPPKAKPDVV
201: QPQPLTNGKL TWEQSELPVS RPEEIQIQPP QLPLQPQQPV KRPPGRPRKD GTSPTVKPAA SVSGGVETVK RRGRPPSGRA AGRERKPIVV SAPASVFPYV
301: ANGGVRRRGR PKRVDAGGAS SVAPPPPPPT NVESGGEEVA VKKRGRGRPP KIGGVIRKPM KPMRSFARTG KPVGRPRKNA VSVGASGRQD GDYGELKKKF
401: ELFQARAKDI VIVLKSEIGG SGNQAVVQAI QDLEGIAETT NEPKHMEEVQ LPDEEHLETE PEAEGQGQTE AEAMQEALF
101: SRYIERIYTG IPTAHGALLT HHLKTLKTSG ILVMVKKSYK LASTPPPPPP TSVAPSLEPP RSDFIVNENQ PLPDPVLASS TPQTIKRGRG RPPKAKPDVV
201: QPQPLTNGKL TWEQSELPVS RPEEIQIQPP QLPLQPQQPV KRPPGRPRKD GTSPTVKPAA SVSGGVETVK RRGRPPSGRA AGRERKPIVV SAPASVFPYV
301: ANGGVRRRGR PKRVDAGGAS SVAPPPPPPT NVESGGEEVA VKKRGRGRPP KIGGVIRKPM KPMRSFARTG KPVGRPRKNA VSVGASGRQD GDYGELKKKF
401: ELFQARAKDI VIVLKSEIGG SGNQAVVQAI QDLEGIAETT NEPKHMEEVQ LPDEEHLETE PEAEGQGQTE AEAMQEALF
Arabidopsis Description
HON5At1g48620 [Source:UniProtKB/TrEMBL;Acc:Q4V3D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.