Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72147 | Soybean | cytosol | 26.67 | 41.56 |
| KRG94697 | Soybean | cytosol | 30.83 | 41.11 |
| KRH72991 | Soybean | nucleus | 27.5 | 37.5 |
| KRH72989 | Soybean | nucleus | 27.08 | 36.93 |
| KRH17355 | Soybean | nucleus | 26.67 | 36.36 |
| KRH17357 | Soybean | nucleus | 26.67 | 36.36 |
| KRG97935 | Soybean | nucleus | 26.25 | 34.62 |
| KRH30939 | Soybean | nucleus | 26.25 | 34.24 |
| KRH39095 | Soybean | nucleus | 58.33 | 28.17 |
| VIT_17s0000g02550.t01 | Wine grape | nucleus | 37.92 | 25.63 |
| KRH41804 | Soybean | nucleus | 41.25 | 23.97 |
| KRH60528 | Soybean | nucleus | 35.42 | 22.19 |
| CDY04315 | Canola | nucleus, plastid | 35.83 | 19.03 |
| CDX93685 | Canola | nucleus | 31.25 | 18.29 |
| Bra018744.1-P | Field mustard | nucleus | 30.83 | 18.27 |
| CDY67892 | Canola | nucleus | 21.25 | 17.47 |
| CDY40600 | Canola | nucleus | 31.25 | 16.85 |
| CDX95791 | Canola | nucleus | 22.08 | 16.36 |
| AT1G48620.1 | Thale cress | nucleus | 32.5 | 16.28 |
| CDY18486 | Canola | nucleus | 31.25 | 15.82 |
| CDX95560 | Canola | plastid | 32.08 | 15.65 |
| Bra021288.1-P | Field mustard | nucleus | 29.58 | 15.6 |
| Solyc03g119130.2.1 | Tomato | nucleus | 33.33 | 15.44 |
| AT3G18035.1 | Thale cress | nucleus | 30.83 | 15.42 |
| PGSC0003DMT400014700 | Potato | extracellular, nucleus | 32.92 | 14.99 |
| CDX95794 | Canola | nucleus | 25.42 | 14.42 |
| CDY59682 | Canola | nucleus, plastid | 32.5 | 12.98 |
| Bra032258.1-P | Field mustard | nucleus, plastid | 31.67 | 12.6 |
| CDX92189 | Canola | nucleus | 21.25 | 11.92 |
| Bra022274.1-P | Field mustard | nucleus | 21.67 | 11.63 |
| Bra022273.1-P | Field mustard | nucleus | 23.75 | 11.31 |
| CDX75957 | Canola | nucleus | 28.75 | 11.2 |
| CDX92188 | Canola | nucleus | 23.33 | 11.18 |
| Bra001696.1-P | Field mustard | nucleus | 27.92 | 10.84 |
| CDY51930 | Canola | nucleus | 27.92 | 10.84 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:35.2 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlantsGene:GLYMA_U043500 | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:Histone_H1/H5_H15 | InterPro:Histone_H5 | InterPro:IPR005818 | InterPro:IPR036388 | UniProt:K7L454 | EnsemblPlants:KRG88430 |
| ProteinID:KRG88430 | ProteinID:KRG88430.1 | PFAM:PF00538 | PFAM:PF02178 | PRINTS:PR00624 | PRINTS:PR00929 |
| PFscan:PS51504 | PANTHER:PTHR11467 | PANTHER:PTHR11467:SF33 | SMART:SM00384 | SMART:SM00526 | SUPFAM:SSF46785 |
| UniParc:UPI0002950718 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_846:+:5025..5992
Molecular Weight (calculated)
25696.8 Da
IEP (calculated)
10.843
GRAVY (calculated)
-0.766
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSSISPPP APPATAVPFP AEPNDHLPPP ISEPPSNHPP YAEMIYTAIE ALKEKEGSSK RAIAKYIEQV YKEHLPPNHS ILLTQHLTLL KSSGMLQMVK
101: KSYALPRSVP LTGAAPAQAH DAATSALQLT SPRPRGRPRK AQIPVQNLPQ DINVQVQQNA EPVWAALGLA DEPVQTEGSS KKRGRPKKSV TPGAGPAKRG
201: RPPGSGTRLG RPPKDKSVTT TTTDVSGPKR RPGRPPKNQS
101: KSYALPRSVP LTGAAPAQAH DAATSALQLT SPRPRGRPRK AQIPVQNLPQ DINVQVQQNA EPVWAALGLA DEPVQTEGSS KKRGRPKKSV TPGAGPAKRG
201: RPPGSGTRLG RPPKDKSVTT TTTDVSGPKR RPGRPPKNQS
001: MDPSLGDPHH PPQFTPFPHF PTSNHHPLGP NPYNNHVVFQ PQPQTQTQIP QPQMFQLSPH VSMPHPPYSE MICAAIAALN EPDGSSKMAI SRYIERCYTG
101: LTSAHAALLT HHLKTLKTSG VLSMVKKSYK IAGSSTPPAS VAVAAAAAAQ GLDVPRSEIL HSSNNDPMAS GSASQPLKRG RGRPPKPKPE SQPQPLQQLP
201: PTNQVQANGQ PIWEQQQVQS PVPVPTPVTE SAKRGPGRPR KNGSAAPATA PIVQASVMAG IMKRRGRPPG RRAAGRQRKP KSVSSTASVY PYVANGARRR
301: GRPRRVVDPS SIVSVAPVGG ENVAAVAPGM KRGRGRPPKI GGVISRLIMK PKRGRGRPVG RPRKIGTSVT TGTQDSGELK KKFDIFQEKV KEIVKVLKDG
401: VTSENQAVVQ AIKDLEALTV TETVEPQVME EVQPEETAAP QTEAQQTEAA ETQGGQEEGQ EREGETQTQT EAEAMQEALF
101: LTSAHAALLT HHLKTLKTSG VLSMVKKSYK IAGSSTPPAS VAVAAAAAAQ GLDVPRSEIL HSSNNDPMAS GSASQPLKRG RGRPPKPKPE SQPQPLQQLP
201: PTNQVQANGQ PIWEQQQVQS PVPVPTPVTE SAKRGPGRPR KNGSAAPATA PIVQASVMAG IMKRRGRPPG RRAAGRQRKP KSVSSTASVY PYVANGARRR
301: GRPRRVVDPS SIVSVAPVGG ENVAAVAPGM KRGRGRPPKI GGVISRLIMK PKRGRGRPVG RPRKIGTSVT TGTQDSGELK KKFDIFQEKV KEIVKVLKDG
401: VTSENQAVVQ AIKDLEALTV TETVEPQVME EVQPEETAAP QTEAQQTEAA ETQGGQEEGQ EREGETQTQT EAEAMQEALF
Arabidopsis Description
HON4At3g18035 [Source:UniProtKB/TrEMBL;Acc:Q9LSK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.