CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94697	Soybean	cytosol	46.75	40.0
KRG88430	Soybean	nucleus	41.56	26.67
KRH30939	Soybean	nucleus	29.87	25.0
KRH72991	Soybean	nucleus	27.92	24.43
KRH72989	Soybean	nucleus	27.92	24.43
KRH17355	Soybean	nucleus	27.92	24.43
KRG97935	Soybean	nucleus	28.57	24.18
KRH17357	Soybean	nucleus	27.27	23.86
KRH60528	Soybean	nucleus	41.56	16.71
KRH41804	Soybean	nucleus	40.91	15.25
VIT_17s0000g02550.t01	Wine grape	nucleus	35.06	15.21
KRH39095	Soybean	nucleus	48.05	14.89
Bra018744.1-P	Field mustard	nucleus	31.82	12.1
CDX93685	Canola	nucleus	31.82	11.95
CDY04315	Canola	nucleus, plastid	34.42	11.73
CDY67892	Canola	nucleus	22.08	11.64
AT1G48620.1	Thale cress	nucleus	34.42	11.06
CDY40600	Canola	nucleus	31.82	11.01
AT3G18035.1	Thale cress	nucleus	33.12	10.62
Solyc03g119130.2.1	Tomato	nucleus	35.06	10.42
Bra021288.1-P	Field mustard	nucleus	30.52	10.33
CDX95791	Canola	nucleus	21.43	10.19
CDY18486	Canola	nucleus	31.17	10.13
CDX95560	Canola	plastid	31.17	9.76
PGSC0003DMT400014700	Potato	extracellular, nucleus	33.12	9.68
CDY59682	Canola	nucleus, plastid	33.77	8.65
Bra032258.1-P	Field mustard	nucleus, plastid	33.77	8.62
CDX95794	Canola	nucleus	22.73	8.27
CDX92188	Canola	nucleus	26.62	8.18
Bra022273.1-P	Field mustard	nucleus	26.62	8.13
CDX92189	Canola	nucleus	22.08	7.94
Bra022274.1-P	Field mustard	nucleus	22.73	7.83
CDX75957	Canola	nucleus	27.92	6.98
Bra001696.1-P	Field mustard	nucleus	27.27	6.8
CDY51930	Canola	nucleus	27.27	6.8

Protein Annotations

Gene3D:1.10.10.10	MapMan:35.2	EMBL:ACUP02001173	EnsemblPlantsGene:GLYMA_02G194100	GO:GO:0000786	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:Histone_H1/H5_H15	InterPro:IPR005818	InterPro:IPR036388	UniProt:K7K9J1	EnsemblPlants:KRH72147	ProteinID:KRH72147
ProteinID:KRH72147.1	PFAM:PF00538	PFscan:PS51504	PANTHER:PTHR11467	PANTHER:PTHR11467:SF33	SMART:SM00526
SUPFAM:SSF46785	UniParc:UPI000294988C	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:36737047..36738770

Molecular Weight (calculated)

17000.7 Da

IEP (calculated)

10.322

GRAVY (calculated)

-0.201

Length

154 amino acids

Sequence
(BLAST)

001: MIYTAIEALK EKDGSSKRAI AKYIEQVYTQ LPPNHSNLLT QHLTHLKSRG LLQMVKKSYG LPRSVPVSIP GPAPTEGTSV VPAAVVAITT TPRPRGRPHK
101: AQNPVQNSPL PQDIVNVQVQ QNAEPVWTAL GLADEIGLCK LQMFFFQLFF KNFS

Best Arabidopsis Sequence Match ( AT1G48620.1 )
(BLAST)

001: MDPSLSATND PHHPPPPQFT SFPPFTNTNP FASPNHPFFT GPTAVAPPNN IHLYQAAPPQ QPQTSPVPPH PSISHPPYSD MICTAIAALN EPDGSSKQAI
101: SRYIERIYTG IPTAHGALLT HHLKTLKTSG ILVMVKKSYK LASTPPPPPP TSVAPSLEPP RSDFIVNENQ PLPDPVLASS TPQTIKRGRG RPPKAKPDVV
201: QPQPLTNGKL TWEQSELPVS RPEEIQIQPP QLPLQPQQPV KRPPGRPRKD GTSPTVKPAA SVSGGVETVK RRGRPPSGRA AGRERKPIVV SAPASVFPYV
301: ANGGVRRRGR PKRVDAGGAS SVAPPPPPPT NVESGGEEVA VKKRGRGRPP KIGGVIRKPM KPMRSFARTG KPVGRPRKNA VSVGASGRQD GDYGELKKKF
401: ELFQARAKDI VIVLKSEIGG SGNQAVVQAI QDLEGIAETT NEPKHMEEVQ LPDEEHLETE PEAEGQGQTE AEAMQEALF

Arabidopsis Description

HON5At1g48620 [Source:UniProtKB/TrEMBL;Acc:Q4V3D1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.