Factsheet for HORVU3Hr1G082070.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G417800.1	Wheat	cytosol	86.03	98.06
TraesCS3A01G385600.1	Wheat	cytosol	97.1	97.44
TraesCS3D01G378700.1	Wheat	cytosol	96.59	97.26
Zm00001d042661_P001	Maize	cytosol	88.25	88.1
Zm00001d012247_P001	Maize	cytosol	87.56	87.86
Os01t0874900-01	Rice	extracellular	89.44	87.5
EES01843	Sorghum	cytosol	88.08	87.18
KRH26369	Soybean	cytosol	70.02	73.0
KRH44066	Soybean	plastid	68.99	71.55
KRH64759	Soybean	cytosol, peroxisome	12.61	71.15
VIT_12s0034g02380.t01	Wine grape	cytosol	69.68	70.88
GSMUA_Achr6P17750_001	Banana	cytosol	67.8	69.58
VIT_18s0001g04340.t01	Wine grape	cytosol, nucleus, plastid	67.8	68.15
PGSC0003DMT400061157	Potato	cytosol	67.63	66.83
GSMUA_Achr10P...	Banana	cytosol	65.42	66.78
KRH53150	Soybean	cytosol, nucleus, peroxisome, plastid	62.01	66.42
Solyc01g104000.2.1	Tomato	plastid	66.95	66.16
CDY38837	Canola	cytosol	62.69	65.36
AT1G36370.1	Thale cress	plastid	66.1	64.88
Bra036774.1-P	Field mustard	cytosol	64.91	64.58
CDX91734	Canola	cytosol	64.74	64.52
CDY41886	Canola	cytosol	64.74	64.41
CDY41499	Canola	cytosol	62.18	63.92
CDY30643	Canola	cytosol	62.35	63.21
Bra016392.1-P	Field mustard	cytosol	62.01	62.98
Bra031358.1-P	Field mustard	cytosol	62.35	62.78
HORVU1Hr1G055860.2	Barley	plasma membrane	50.26	62.63
CDY04695	Canola	cytosol	62.18	62.18
AT1G22020.1	Thale cress	cytosol	62.69	61.44
KRH64758	Soybean	cytosol	49.23	58.03
HORVU2Hr1G110110.2	Barley	mitochondrion, plastid	51.11	54.45
GSMUA_Achr10P...	Banana	vacuole	15.16	52.35
HORVU4Hr1G011500.1	Barley	plasma membrane	43.1	47.47

Protein Annotations

KEGG:00260+2.1.2.1	KEGG:00460+2.1.2.1	KEGG:00630+2.1.2.1	KEGG:00670+2.1.2.1	KEGG:00680+2.1.2.1	MapMan:1.3.5
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.4.3.1	UniProt:A0A287LXX9	GO:GO:0003674	GO:GO:0003824
GO:GO:0004372	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019264	GO:GO:0030170	GO:GO:0035999	EnsemblPlantsGene:HORVU3Hr1G082070
EnsemblPlants:HORVU3Hr1G082070.2	InterPro:IPR001680	InterPro:IPR015421	InterPro:IPR015422	HAMAP:MF_00051	PFAM:PF00464
ScanProsite:PS00678	PFscan:PS50082	PANTHER:PTHR11680	PANTHER:PTHR11680:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	InterPro:Ser_HO-MeTrfase	UniParc:UPI000B47B013	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:597613534..597722565

Molecular Weight (calculated)

63786.5 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.368

Length

587 amino acids

Sequence
(BLAST)

001: MDLSRPESSD LSLGLHPHAH ANAHARAHAR AATPLRLFDD SDDVKTEGSV GGGGGGDGEN GDDEGADQHF SLLGHSLCVK RPRNALYGGG GGEASSCSSS
101: SAAMRPAKRQ AAGADLEARR RAVRAWGNQP LAEADPDVHA LMERERDRQV RGIELIASEN FVCRAVLDAL GSHLTNKYSE GHPGARYYGG NQHIDAIERL
201: CHQRALTAFG LDPACWGVNV QPYSCTSANL AVYTGLLLPN DRIMGLEPPS GGHVSHGYYT PSGKKVSGAS IFFESLSYKV NPQTGYIDYD KLEDRAMDFH
301: PKILICGGSS YPREWDFARM RLIADKCGAV LMCDMAHISG LVAAKECRSP FDYCDVITST THKNLRGPRG GIIFFRKGKN MRKRGGSFSQ GDENDYDFED
401: KINFAVFPSL QGGPHNNHIA ALAITLKQVA TPEYKAYIQQ VMKNAQALAS ALLRRKCRLV TGGTDNHLVL WDLRTFGLTG KNFEKVCELC HISINKTPIY
501: GDNGSISPGG VRIGTPAMTT RGCLEDDFEV IADFLIRATQ IAGSVLKQHG KVQKEFLRGL ENNKDIIELG NQVEAFASQF AMPGFDV

Best Arabidopsis Sequence Match ( AT1G36370.1 )
(BLAST)

001: MDLSRSQTNF QLGFGCSHAS MTPTPTPRAP IADDSINLQV DQSFRSLPTT FSPIPLQLLE QKAEKTTTVD EPKKDGGGGG DQKEDEHFRI LGHHMCLKRQ
101: RDCPLLLTQS KHPKRSSIGD SDLESRRAAV RAWGDQPIHL ADPDIHELME KEKQRQVRGI ELIASENFVC RAVMEALGSH LTNKYSEGMP GARYYTGNQY
201: IDQIENLCIE RALTAFGLES DKWGVNVQPY SCTSANFAVY TGLLLPGERI MGLDSPSGGH MSHGYCTPGG KKISAASIFF ESFPYKVNPQ TGYIDYDKLE
301: DKALDYRPKI LICGGSSYPR DWDFARVRQI ADKCGAVLMC DMAHISGLVA TKECSNPFDH CDIVTSTTHK GLRGPRGGII FYRRGPKIRK QGHHSSHCDT
401: STHYDLEEKI NFAVFPSLQG GPHNNHIAAL AIALKQVATP EYKAYIQQMK KNAQALAAAL LRRKCRLVTG GTDNHLLLWD LTPMGLTGKV YEKVCEMCHI
501: TLNKTAIFGD NGTISPGGVR IGTPAMTTRG CIESDFETMA DFLIKAAQIT SALQREHGKS HKEFVKSLCT NKDIAELRNR VEAFALQYEM PASLIRIE

Arabidopsis Description

SHM7Serine hydroxymethyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.