CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53150	Soybean	cytosol, nucleus, peroxisome, plastid	98.08	18.61
KRH11116	Soybean	cytosol	42.31	18.03
TraesCS3B01G417800.1	Wheat	cytosol	71.15	14.37
VIT_18s0001g04340.t01	Wine grape	cytosol, nucleus, plastid	78.85	14.04
KRH44066	Soybean	plastid	73.08	13.43
KRH26369	Soybean	cytosol	72.12	13.32
Os05t0429000-01	Rice	cytosol	75.0	13.29
Os01t0874900-01	Rice	extracellular	75.0	13.0
Zm00001d012247_P001	Maize	cytosol	73.08	12.99
Zm00001d042661_P001	Maize	cytosol	73.08	12.93
EES01843	Sorghum	cytosol	73.08	12.82
GSMUA_Achr6P17750_001	Banana	cytosol	70.19	12.76
TraesCS3D01G378700.1	Wheat	cytosol	71.15	12.69
TraesCS3A01G385600.1	Wheat	cytosol	71.15	12.65
HORVU3Hr1G082070.2	Barley	cytosol	71.15	12.61
AT1G36370.1	Thale cress	plastid	71.15	12.37
Bra036774.1-P	Field mustard	cytosol	70.19	12.37
CDY41886	Canola	cytosol	70.19	12.37
CDY41499	Canola	cytosol	67.31	12.26
CDY38837	Canola	cytosol	66.35	12.26
CDX91734	Canola	cytosol	69.23	12.22
Bra016392.1-P	Field mustard	cytosol	67.31	12.11
GSMUA_Achr10P...	Banana	cytosol	66.35	12.0
CDY30643	Canola	cytosol	66.35	11.92
Bra031358.1-P	Field mustard	cytosol	66.35	11.84
CDY04695	Canola	cytosol	66.35	11.75
AT1G22020.1	Thale cress	cytosol	67.31	11.69
KRH58850	Soybean	cytosol	49.04	10.65
KRH42751	Soybean	endoplasmic reticulum, nucleus	55.77	10.14
KRH45493	Soybean	mitochondrion	42.31	8.49
KRH72501	Soybean	mitochondrion	41.35	8.37
KRH39500	Soybean	mitochondrion	40.38	8.12
KRG99502	Soybean	mitochondrion	40.38	8.11
KRH16896	Soybean	mitochondrion	38.46	7.89
KRH21130	Soybean	plastid	39.42	7.65
KRH18830	Soybean	cytosol, peroxisome, plastid	2.88	2.33
KRH07754	Soybean	cytosol, nucleus, peroxisome	1.92	0.93
GSMUA_Achr10P...	Banana	vacuole	0.96	0.59
KRH26204	Soybean	cytosol	0.96	0.5
KRH64758	Soybean	cytosol	0.0	0.0
KRH11117	Soybean	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02002773	EnsemblPlants:KRH64759	EnsemblPlantsGene:GLYMA_04G2543001	Gene3D:3.90.1150.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR015422	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	PANTHER:PTHR11680	PANTHER:PTHR11680:SF27	PFAM:PF00464
ProteinID:KRH64759	ProteinID:KRH64759.1	SUPFAM:SSF53383	UniParc:UPI0006EDAD95	UniProt:A0A0R0KCL6	MapMan:35.1

Description

hypothetical protein

Coordinates

chr4:+:52103642..52104873

Molecular Weight (calculated)

11651.9 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.380

Length

104 amino acids

Sequence
(BLAST)

001: RNYEKVCEAC RITLNKCAIY GSISPGGVRI GTPAMTSRGC LEEDFETIAD FLRRAAQITS IVQREHGKSC KDFLKGLQNN KDISELRNRV ETFSSQFAMP
101: GFDI

Best Arabidopsis Sequence Match ( AT1G36370.1 )
(BLAST)

001: MDLSRSQTNF QLGFGCSHAS MTPTPTPRAP IADDSINLQV DQSFRSLPTT FSPIPLQLLE QKAEKTTTVD EPKKDGGGGG DQKEDEHFRI LGHHMCLKRQ
101: RDCPLLLTQS KHPKRSSIGD SDLESRRAAV RAWGDQPIHL ADPDIHELME KEKQRQVRGI ELIASENFVC RAVMEALGSH LTNKYSEGMP GARYYTGNQY
201: IDQIENLCIE RALTAFGLES DKWGVNVQPY SCTSANFAVY TGLLLPGERI MGLDSPSGGH MSHGYCTPGG KKISAASIFF ESFPYKVNPQ TGYIDYDKLE
301: DKALDYRPKI LICGGSSYPR DWDFARVRQI ADKCGAVLMC DMAHISGLVA TKECSNPFDH CDIVTSTTHK GLRGPRGGII FYRRGPKIRK QGHHSSHCDT
401: STHYDLEEKI NFAVFPSLQG GPHNNHIAAL AIALKQVATP EYKAYIQQMK KNAQALAAAL LRRKCRLVTG GTDNHLLLWD LTPMGLTGKV YEKVCEMCHI
501: TLNKTAIFGD NGTISPGGVR IGTPAMTTRG CIESDFETMA DFLIKAAQIT SALQREHGKS HKEFVKSLCT NKDIAELRNR VEAFALQYEM PASLIRIE

Arabidopsis Description

SHM7Serine hydroxymethyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.