CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93392	Soybean	nucleus	45.94	84.97
PGSC0003DMT400085909	Potato	cytosol	21.2	52.63
Solyc02g087140.2.1	Tomato	cytosol	51.59	50.52
Solyc02g087130.2.1	Tomato	nucleus	50.53	49.65
GSMUA_Achr9P16450_001	Banana	nucleus	31.1	47.06
AT3G01410.1	Thale cress	nucleus	47.7	45.92
CDX74299	Canola	cytosol	31.45	45.41
KRG99252	Soybean	mitochondrion	55.48	44.6
Bra040514.1-P	Field mustard	nucleus	47.7	44.55
CDY28678	Canola	nucleus	47.7	44.55
Zm00001d032798_P001	Maize	nucleus	45.94	44.52
KXG38410	Sorghum	cytosol	45.58	44.18
KRH45746	Soybean	nucleus	55.48	44.1
Zm00001d049892_P001	Maize	mitochondrion	36.75	43.88
CDX91946	Canola	cytosol	30.04	43.81
CDX74301	Canola	mitochondrion	27.21	42.31
HORVU5Hr1G067140.3	Barley	nucleus	22.26	42.0
Os10t0458700-02	Rice	nucleus, plasma membrane	46.64	40.87
CDY71303	Canola	nucleus	27.92	38.92
GSMUA_Achr9P17780_001	Banana	mitochondrion	43.11	38.85
KXG21007	Sorghum	mitochondrion	46.29	38.64
TraesCS1B01G161700.1	Wheat	cytosol	36.04	38.35
TraesCS1D01G143400.1	Wheat	cytosol, nucleus, plastid	43.82	38.27
TraesCS1A01G144300.2	Wheat	cytosol, nucleus, plastid	43.46	37.96
GSMUA_Achr9P16430_001	Banana	plasma membrane	24.03	37.57
TraesCS4A01G463700.1	Wheat	plastid	45.23	36.89
TraesCS7A01G025300.1	Wheat	mitochondrion	45.23	36.89
TraesCS5A01G355500.1	Wheat	plastid	44.17	36.66
Os08t0177800-00	Rice	mitochondrion	45.23	36.47
TraesCS7D01G023200.1	Wheat	mitochondrion	44.88	36.39
Zm00001d035750_P001	Maize	plastid	38.52	35.97
TraesCS5D01G363800.1	Wheat	golgi, mitochondrion	44.52	31.98

Protein Annotations

EntrezGene:100796237	MapMan:15.3.7.2.2	Gene3D:3.30.420.10	EMBL:ACUP02008097	EnsemblPlantsGene:GLYMA_13G070200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004518	GO:GO:0004523	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0090502	InterPro:IPR002156
InterPro:IPR036397	UniProt:K7LXC0	ProteinID:KRH18594.1	ProteinID:KRH18595.1	EnsemblPlants:KRH18596	ProteinID:KRH18596
ProteinID:KRH18596.1	PFAM:PF13456	PFscan:PS50879	PANTHER:PTHR33033	PANTHER:PTHR33033:SF30	InterPro:RNaseH-like_sf
InterPro:RNaseH_domain	InterPro:RNaseH_sf	SUPFAM:SSF53098	UniParc:UPI0001BA8174	:	:

Description

hypothetical protein

Coordinates

chr13:-:17030579..17037013

Molecular Weight (calculated)

30660.3 Da

IEP (calculated)

8.048

GRAVY (calculated)

-0.267

Length

283 amino acids

Sequence
(BLAST)

001: MAEEKDAFYV VRKGDVVGIY KSFSDIQPLL ASSVSSDPVS IYKGYSLPQK TEEYLVSHGL KGAPYSISAA DVNEGLFGRL VACPYQDPYS SGGRAFNVSS
101: SSRNLQGAIQ FDTGKLAGSF SYPPNSLRNH TLGGSQAEWS SCLSCTLHFD GASKGNPGPA GAGAILHDGS KVYRLREGVG IQTNNVAEYR SLILGLKHAL
201: KKGYKHIIVQ GDSLLVCNQI QGLWKIKNQN MGTLCAEAKE LKDKFLSFKI SHIPREYNSE ADAQANLAIN LRACEVQEDC QLL

Best Arabidopsis Sequence Match ( AT1G24090.1 )
(BLAST)

001: MNCLSHARSY IALGLLKRSS YVSSIPWNEC FFYMPSKSCL KPVAVSSVFG ICSVHSYSSR SKAVKSKMLS STVVSAVDKE KDAFFVVRKG DVIGIYKDLS
101: DCQAQVGSSV FDLPVSVYKG YSLPKDTEEY LSSVGLKKPL YSLRASDLKD DMFGALTPCL FQEPAPCTVK VSEDETTSET KSKDDKKDQL PSASISYDPL
201: EKLSKVEPSA YISDETCFIE FDGASKGNPG LSGAAAVLKT EDGSLICRVR QGLGIATNNA AEYHALILGL KYAIEKGYKN IKVKGDSKLV CMQIKGQWKV
301: NHEVLAKLHK EAKLLCNKCV SFEISHVLRN LNADADEQAN LAVRLPEGEV EVA

Arabidopsis Description

RNase H domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I7R5]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.