Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93392 | Soybean | nucleus | 23.76 | 28.1 |
| Zm00001d049892_P001 | Maize | mitochondrion | 36.46 | 27.85 |
| Solyc04g005010.2.1 | Tomato | nucleus | 38.67 | 24.65 |
| PGSC0003DMT400040239 | Potato | nucleus | 38.67 | 24.22 |
| KRH18596 | Soybean | nucleus | 37.57 | 24.03 |
| AT3G01410.1 | Thale cress | nucleus | 38.67 | 23.81 |
| PGSC0003DMT400042267 | Potato | nucleus | 38.67 | 23.1 |
| Solyc02g087130.2.1 | Tomato | nucleus | 36.46 | 22.92 |
| Solyc02g087140.2.1 | Tomato | cytosol | 36.46 | 22.84 |
| Solyc01g008060.2.1 | Tomato | nucleus | 38.12 | 22.77 |
| Os08t0177800-00 | Rice | mitochondrion | 43.65 | 22.51 |
| VIT_01s0026g00690.t01 | Wine grape | mitochondrion | 40.33 | 22.05 |
| KXG21007 | Sorghum | mitochondrion | 40.88 | 21.83 |
| CDY28678 | Canola | nucleus | 36.46 | 21.78 |
| Bra040514.1-P | Field mustard | nucleus | 36.46 | 21.78 |
| TraesCS5A01G355500.1 | Wheat | plastid | 40.88 | 21.7 |
| KRH45746 | Soybean | nucleus | 42.54 | 21.63 |
| TraesCS4A01G463700.1 | Wheat | plastid | 41.44 | 21.61 |
| AT1G24090.1 | Thale cress | mitochondrion, plastid | 41.99 | 21.53 |
| AT5G51080.1 | Thale cress | mitochondrion | 38.12 | 21.43 |
| KRG99252 | Soybean | mitochondrion | 41.44 | 21.31 |
| TraesCS7D01G023200.1 | Wheat | mitochondrion | 40.88 | 21.2 |
| Zm00001d035750_P001 | Maize | plastid | 35.36 | 21.12 |
| TraesCS7A01G025300.1 | Wheat | mitochondrion | 40.33 | 21.04 |
| GSMUA_Achr9P17780_001 | Banana | mitochondrion | 34.81 | 20.06 |
| PGSC0003DMT400004838 | Potato | extracellular | 38.67 | 19.13 |
| Solyc05g006090.2.1 | Tomato | nucleus | 38.67 | 19.07 |
| TraesCS5D01G363800.1 | Wheat | golgi, mitochondrion | 40.88 | 18.78 |
| CDY16247 | Canola | cytosol, nucleus, plastid | 38.67 | 18.04 |
| CDX74301 | Canola | mitochondrion | 12.71 | 12.64 |
| GSMUA_Achr9P16450_001 | Banana | nucleus | 12.71 | 12.3 |
| PGSC0003DMT400085909 | Potato | cytosol | 7.18 | 11.4 |
| HORVU5Hr1G067140.3 | Barley | nucleus | 9.39 | 11.33 |
| CDY60797 | Canola | golgi, nucleus, plastid | 37.57 | 11.2 |
| CDY71303 | Canola | nucleus | 12.15 | 10.84 |
| CDX91946 | Canola | cytosol | 11.05 | 10.31 |
| CDX74299 | Canola | cytosol | 11.05 | 10.2 |
| Bra024633.1-P | Field mustard | cytosol, nucleus, plastid | 25.97 | 7.87 |
| CDY16246 | Canola | mitochondrion | 9.39 | 7.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P16430_001 | EnsemblPlants:GSMUA_Achr9T16430_001 | EnsemblPlantsGene:GSMUA_Achr9G16430_001 | Gene3D:3.40.970.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR037056 | InterPro:RNase_H1_N | InterPro:RNase_H1_N_sf | InterPro:Ribosomal_L9/RNase_H1_N | PANTHER:PTHR33033 |
| PANTHER:PTHR33033:SF30 | PFAM:PF01693 | SEG:seg | SUPFAM:SSF55658 | TMHMM:TMhelix | UniParc:UPI000295D09D |
| UniProt:M0U0V0 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G16430_001]
Coordinates
chr9:+:11079282..11084943
Molecular Weight (calculated)
20273.9 Da
IEP (calculated)
5.185
GRAVY (calculated)
0.493
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEESNAFYV VRKGDIVGIY KSLSDCQAQV SVSVCGPPVS VYKGYGLRKE TEEYLASRGL KNPLYSVNAS DVKEDLFGAL LPCPFQQPDG LADILPKKVS
101: SLKRTKDMVL LIFCQLLCLC YSDVHFCELQ NFDLSVDNNM LCKFSLCFLI VSFLYVFVTG VACLPIYFAF NILIVFLSFS F
101: SLKRTKDMVL LIFCQLLCLC YSDVHFCELQ NFDLSVDNNM LCKFSLCFLI VSFLYVFVTG VACLPIYFAF NILIVFLSFS F
001: MNCLSHARSY IALGLLKRSS YVSSIPWNEC FFYMPSKSCL KPVAVSSVFG ICSVHSYSSR SKAVKSKMLS STVVSAVDKE KDAFFVVRKG DVIGIYKDLS
101: DCQAQVGSSV FDLPVSVYKG YSLPKDTEEY LSSVGLKKPL YSLRASDLKD DMFGALTPCL FQEPAPCTVK VSEDETTSET KSKDDKKDQL PSASISYDPL
201: EKLSKVEPSA YISDETCFIE FDGASKGNPG LSGAAAVLKT EDGSLICRVR QGLGIATNNA AEYHALILGL KYAIEKGYKN IKVKGDSKLV CMQIKGQWKV
301: NHEVLAKLHK EAKLLCNKCV SFEISHVLRN LNADADEQAN LAVRLPEGEV EVA
101: DCQAQVGSSV FDLPVSVYKG YSLPKDTEEY LSSVGLKKPL YSLRASDLKD DMFGALTPCL FQEPAPCTVK VSEDETTSET KSKDDKKDQL PSASISYDPL
201: EKLSKVEPSA YISDETCFIE FDGASKGNPG LSGAAAVLKT EDGSLICRVR QGLGIATNNA AEYHALILGL KYAIEKGYKN IKVKGDSKLV CMQIKGQWKV
301: NHEVLAKLHK EAKLLCNKCV SFEISHVLRN LNADADEQAN LAVRLPEGEV EVA
Arabidopsis Description
RNase H domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I7R5]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.