Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT1G24090.1 | Thale cress | mitochondrion, plastid | 73.29 | 66.86 |
CDY16247 | Canola | cytosol, nucleus, plastid | 69.25 | 57.47 |
Solyc04g005010.2.1 | Tomato | nucleus | 43.48 | 49.3 |
PGSC0003DMT400040239 | Potato | nucleus | 42.55 | 47.4 |
PGSC0003DMT400042267 | Potato | nucleus | 43.48 | 46.2 |
Solyc01g008060.2.1 | Tomato | nucleus | 43.17 | 45.87 |
VIT_01s0026g00690.t01 | Wine grape | mitochondrion | 46.89 | 45.62 |
Zm00001d049892_P001 | Maize | mitochondrion | 33.23 | 45.15 |
KRH45746 | Soybean | nucleus | 49.07 | 44.38 |
KRG99252 | Soybean | mitochondrion | 48.14 | 44.03 |
GSMUA_Achr9P16450_001 | Banana | nucleus | 25.47 | 43.85 |
PGSC0003DMT400004838 | Potato | extracellular | 48.14 | 42.35 |
Solyc05g006090.2.1 | Tomato | nucleus | 47.83 | 41.96 |
KXG38410 | Sorghum | cytosol | 36.96 | 40.75 |
Zm00001d032798_P001 | Maize | nucleus | 36.34 | 40.07 |
AT3G01410.1 | Thale cress | nucleus | 36.34 | 39.8 |
KXG21007 | Sorghum | mitochondrion | 40.68 | 38.64 |
TraesCS5A01G355500.1 | Wheat | plastid | 40.37 | 38.12 |
GSMUA_Achr9P16430_001 | Banana | plasma membrane | 21.43 | 38.12 |
TraesCS7A01G025300.1 | Wheat | mitochondrion | 40.68 | 37.75 |
TraesCS4A01G463700.1 | Wheat | plastid | 40.68 | 37.75 |
Zm00001d035750_P001 | Maize | plastid | 35.4 | 37.62 |
TraesCS1D01G143400.1 | Wheat | cytosol, nucleus, plastid | 37.58 | 37.35 |
TraesCS1A01G144300.2 | Wheat | cytosol, nucleus, plastid | 37.58 | 37.35 |
TraesCS7D01G023200.1 | Wheat | mitochondrion | 40.37 | 37.25 |
TraesCS1B01G161700.1 | Wheat | cytosol | 30.43 | 36.84 |
HORVU5Hr1G067140.3 | Barley | nucleus | 17.08 | 36.67 |
Os08t0177800-00 | Rice | mitochondrion | 39.75 | 36.47 |
Os10t0458700-02 | Rice | nucleus, plasma membrane | 36.34 | 36.22 |
CDY60797 | Canola | golgi, nucleus, plastid | 68.01 | 36.08 |
GSMUA_Achr9P17780_001 | Banana | mitochondrion | 33.23 | 34.08 |
TraesCS5D01G363800.1 | Wheat | golgi, mitochondrion | 38.51 | 31.47 |
Bra024633.1-P | Field mustard | cytosol, nucleus, plastid | 41.61 | 22.45 |
Protein Annotations
MapMan:15.3.7.2.2 | Gene3D:3.30.420.10 | EntrezGene:835181 | ProteinID:AED96030.1 | ProteinID:AED96031.1 | EMBL:AK227408 |
EMBL:AK317499 | ArrayExpress:AT5G51080 | EnsemblPlantsGene:AT5G51080 | RefSeq:AT5G51080 | TAIR:AT5G51080 | RefSeq:AT5G51080-TAIR-G |
EnsemblPlants:AT5G51080.1 | TAIR:AT5G51080.1 | Unigene:At.29696 | EMBL:BT005880 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004523 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090502 | InterPro:IPR002156 | InterPro:IPR036397 | RefSeq:NP_001032053.1 |
RefSeq:NP_199921.2 | PFAM:PF13456 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 |
PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
PO:PO:0025022 | PFscan:PS50879 | PANTHER:PTHR33033 | PANTHER:PTHR33033:SF30 | UniProt:Q84TE0 | InterPro:RNaseH-like_sf |
InterPro:RNaseH_domain | InterPro:RNaseH_sf | SUPFAM:SSF53098 | UniParc:UPI0000060D88 | SEG:seg | : |
Description
AT5G51080 protein [Source:UniProtKB/TrEMBL;Acc:Q84TE0]
Coordinates
chr5:-:20768804..20770977
Molecular Weight (calculated)
35408.4 Da
IEP (calculated)
8.527
GRAVY (calculated)
-0.227
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRFSRARSY ISLVLFRKSS YVTSHIPWNQ CFYTSLKSSL KPASVSVSSV HCYSSRSKTA KSKMSKSSVS VSDSDKEKDA FFVVRKGDIV GIYKDLIDCQ
101: AQVGSSVYDP PVSVYKGYSL LKDTEECLST VGLKKPLYVF RALDLKEDMF GALTPCLFQD QLPSASMSVE KLAELEPSAD TSYETCIIEF DGASKGNPGL
201: SGAAAVLKTE DGSLIFKMRQ GLGIATNNAA EYHGLILGLK HAIEKGYTKI KVKTDSKLVC MQMKGQWKVN HEVLSKLHKE AKQLSDKCLS FEISHVLRSL
301: NSDADEQANM AARLSEGEVE VA
101: AQVGSSVYDP PVSVYKGYSL LKDTEECLST VGLKKPLYVF RALDLKEDMF GALTPCLFQD QLPSASMSVE KLAELEPSAD TSYETCIIEF DGASKGNPGL
201: SGAAAVLKTE DGSLIFKMRQ GLGIATNNAA EYHGLILGLK HAIEKGYTKI KVKTDSKLVC MQMKGQWKVN HEVLSKLHKE AKQLSDKCLS FEISHVLRSL
301: NSDADEQANM AARLSEGEVE VA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.