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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G24090.1 Thale cress mitochondrion, plastid 73.29 66.86
CDY16247 Canola cytosol, nucleus, plastid 69.25 57.47
Solyc04g005010.2.1 Tomato nucleus 43.48 49.3
PGSC0003DMT400040239 Potato nucleus 42.55 47.4
PGSC0003DMT400042267 Potato nucleus 43.48 46.2
Solyc01g008060.2.1 Tomato nucleus 43.17 45.87
VIT_01s0026g00690.t01 Wine grape mitochondrion 46.89 45.62
Zm00001d049892_P001 Maize mitochondrion 33.23 45.15
KRH45746 Soybean nucleus 49.07 44.38
KRG99252 Soybean mitochondrion 48.14 44.03
GSMUA_Achr9P16450_001 Banana nucleus 25.47 43.85
PGSC0003DMT400004838 Potato extracellular 48.14 42.35
Solyc05g006090.2.1 Tomato nucleus 47.83 41.96
KXG38410 Sorghum cytosol 36.96 40.75
Zm00001d032798_P001 Maize nucleus 36.34 40.07
AT3G01410.1 Thale cress nucleus 36.34 39.8
KXG21007 Sorghum mitochondrion 40.68 38.64
TraesCS5A01G355500.1 Wheat plastid 40.37 38.12
GSMUA_Achr9P16430_001 Banana plasma membrane 21.43 38.12
TraesCS7A01G025300.1 Wheat mitochondrion 40.68 37.75
TraesCS4A01G463700.1 Wheat plastid 40.68 37.75
Zm00001d035750_P001 Maize plastid 35.4 37.62
TraesCS1D01G143400.1 Wheat cytosol, nucleus, plastid 37.58 37.35
TraesCS1A01G144300.2 Wheat cytosol, nucleus, plastid 37.58 37.35
TraesCS7D01G023200.1 Wheat mitochondrion 40.37 37.25
TraesCS1B01G161700.1 Wheat cytosol 30.43 36.84
HORVU5Hr1G067140.3 Barley nucleus 17.08 36.67
Os08t0177800-00 Rice mitochondrion 39.75 36.47
Os10t0458700-02 Rice nucleus, plasma membrane 36.34 36.22
CDY60797 Canola golgi, nucleus, plastid 68.01 36.08
GSMUA_Achr9P17780_001 Banana mitochondrion 33.23 34.08
TraesCS5D01G363800.1 Wheat golgi, mitochondrion 38.51 31.47
Bra024633.1-P Field mustard cytosol, nucleus, plastid 41.61 22.45
Protein Annotations
MapMan:15.3.7.2.2Gene3D:3.30.420.10EntrezGene:835181ProteinID:AED96030.1ProteinID:AED96031.1EMBL:AK227408
EMBL:AK317499ArrayExpress:AT5G51080EnsemblPlantsGene:AT5G51080RefSeq:AT5G51080TAIR:AT5G51080RefSeq:AT5G51080-TAIR-G
EnsemblPlants:AT5G51080.1TAIR:AT5G51080.1Unigene:At.29696EMBL:BT005880GO:GO:0003674GO:GO:0003676
GO:GO:0003824GO:GO:0004518GO:GO:0004523GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0090502InterPro:IPR002156InterPro:IPR036397RefSeq:NP_001032053.1
RefSeq:NP_199921.2PFAM:PF13456PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001078
PO:PO:0001185PO:PO:0004507PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009009
PO:PO:0009010PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0025022PFscan:PS50879PANTHER:PTHR33033PANTHER:PTHR33033:SF30UniProt:Q84TE0InterPro:RNaseH-like_sf
InterPro:RNaseH_domainInterPro:RNaseH_sfSUPFAM:SSF53098UniParc:UPI0000060D88SEG:seg:
Description
AT5G51080 protein [Source:UniProtKB/TrEMBL;Acc:Q84TE0]
Coordinates
chr5:-:20768804..20770977
Molecular Weight (calculated)
35408.4 Da
IEP (calculated)
8.527
GRAVY (calculated)
-0.227
Length
322 amino acids
Sequence
(BLAST)
001: MNRFSRARSY ISLVLFRKSS YVTSHIPWNQ CFYTSLKSSL KPASVSVSSV HCYSSRSKTA KSKMSKSSVS VSDSDKEKDA FFVVRKGDIV GIYKDLIDCQ
101: AQVGSSVYDP PVSVYKGYSL LKDTEECLST VGLKKPLYVF RALDLKEDMF GALTPCLFQD QLPSASMSVE KLAELEPSAD TSYETCIIEF DGASKGNPGL
201: SGAAAVLKTE DGSLIFKMRQ GLGIATNNAA EYHGLILGLK HAIEKGYTKI KVKTDSKLVC MQMKGQWKVN HEVLSKLHKE AKQLSDKCLS FEISHVLRSL
301: NSDADEQANM AARLSEGEVE VA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.