CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

plastid 1
extracellular 3
nucleus 1
mitochondrion 1
golgi 2
plasma membrane 3
endoplasmic reticulum 2
vacuole 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73711	Soybean	plasma membrane	43.31	43.78
KRH73712	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.35	37.93
CDX93985	Canola	cytosol, nucleus, plastid	6.37	36.14
KRH46107	Soybean	endoplasmic reticulum, plasma membrane	38.0	33.97
Bra004102.1-P	Field mustard	plasma membrane	23.14	33.96
KRH37978	Soybean	endoplasmic reticulum, plasma membrane	37.58	33.59
CDY16442	Canola	plasma membrane	22.72	32.72
CDY66300	Canola	cytosol	32.06	32.4
CDY70831	Canola	plasma membrane	25.48	32.0
Bra014407.1-P	Field mustard	cytosol	31.63	31.97
CDX93984	Canola	cytosol, nucleus, plasma membrane, plastid	17.83	31.0
CDY16441	Canola	plasma membrane	30.79	30.85
Bra039758.1-P	Field mustard	plasma membrane	30.57	30.64
CDX72454	Canola	extracellular	21.23	30.4
AT3G29830.1	Thale cress	cytosol	29.94	30.39
CDY49279	Canola	extracellular	21.02	30.09
Bra029003.1-P	Field mustard	cytosol, plasma membrane, plastid	29.94	29.94
CDY61650	Canola	plasma membrane	29.72	29.79
CDY07436	Canola	plasma membrane	29.72	29.79
Bra017630.1-P	Field mustard	extracellular	20.81	29.79
CDY52573	Canola	plasma membrane, vacuole	29.51	29.57
AT5G54820.1	Thale cress	plasma membrane	29.3	29.24
AT2G17305.1	Thale cress	cytosol	16.56	28.78
CDX75406	Canola	endoplasmic reticulum, plastid	20.38	28.66
Bra011503.1-P	Field mustard	extracellular, plastid	20.38	28.66
CDX69031	Canola	endoplasmic reticulum, plastid	20.17	28.44
AT1G56400.1	Thale cress	cytosol, endoplasmic reticulum, plastid	28.87	28.39
Bra009781.1-P	Field mustard	plasma membrane	28.24	28.3
AT3G62230.1	Thale cress	endoplasmic reticulum	26.54	27.11
CDY58678	Canola	cytosol	6.58	22.14
Bra004104.1-P	Field mustard	cytosol	6.58	22.14

Protein Annotations

EntrezGene:102661230	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02006613	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
InterPro:FBD	EnsemblPlantsGene:GLYMA_10G200400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LCP6
InterPro:IPR001810	InterPro:IPR032675	EnsemblPlants:KRH34702	ProteinID:KRH34702	ProteinID:KRH34702.1	InterPro:LRR_dom_sf
PFAM:PF00646	PFAM:PF08387	PANTHER:PTHR31639	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI00023CD8E5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:43118470..43121988

Molecular Weight (calculated)

54665.2 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.102

Length

471 amino acids

Sequence
(BLAST)

001: MAWIRRKADK TSLLPEIVLI TIVSFLPFKE AVRTSILSKR WSKIWLSTKN IEFNELFFLN PPETDATKQL QRRTLFFDFI THFMDNYRVI NTVDKFSLKV
101: SNPESCADII ERCVAFATER GVKELRLDFS DPTWEENEDD DNDHHDALFQ LPNHVYRHAS LEALELYACG FAMPDMCNLV ELKDVSFGWI EMSTNTVKTL
201: LSTLGKLENL SMKKCWNLEH FDMRTQEVGL RRLVIDKCHF VISDYVDLRA PNLKFLKYSG KLGIFEVKAL PEVVQEAQLD FTPMPKFEEY GDELCQLLLD
301: LSGVRVLTVC SFLLQALPTG EEQMRMQHDM EVRHLLVNTD LDNQELFGFV LLLSSCVYLE KLTLDIGQGK IYDEHVKPYP FDFAKFCCDQ YAIFECVKDN
401: LKVVEINGSR ASKNELRLCF YLIQVGCVLE KLIINLAKEE GNEMLEIERH ERASLLFDVP KASKNLQIWI V

Best Arabidopsis Sequence Match ( AT5G54820.1 )
(BLAST)

001: MDSIQQDRLS SLPDILLIMI ISFLPLKECV RTSVLSKRWR YLCLETTNLS FKESDYVNPD ITDAEYSRIV AYRSFFCSVD KWVSITQHQV VESFEICFSH
101: LVGFEDKIDA LIEYAVSTRV KNLVVDLSNP SWRSNGDISY RHFMYTLPKS VYSLTTLESL KIYGCKFDPS KFVNPVLLRS LSIGWVRLEN LHSLLSKSPS
201: LQSLSIKNCW GVDITSMAGQ FRELVIEHSD FSYMQCAFEL PRIHSFKYSG ELFEFYFDVV NVIIPNVYLD FGEERVYDLQ SQSSRISGEV ISRIINDLRA
301: AETLTVCPYI LQVIPECEKP SDLLQPMETR HLVLRTKMHT KEFNGIILLL NNCPNLETLG FDILTPCPFS ATSSDEGIDP KTYWMQKRTC KSLRKTLKVV
401: VIRNFCGSSN ELNVLRYLIR SASGAGDALE RVELYVPNGM EESQAMVVFA KAEMLQRTSK HVQVLCAQLL KK

Arabidopsis Description

Putative F-box/LRR-repeat protein At5g54820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFU7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.