Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 4
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73712 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.18 | 46.9 |
| KRH34702 | Soybean | extracellular, plasma membrane | 43.78 | 43.31 |
| KRH46107 | Soybean | endoplasmic reticulum, plasma membrane | 43.56 | 38.52 |
| KRH37978 | Soybean | endoplasmic reticulum, plasma membrane | 43.13 | 38.14 |
| CDX93985 | Canola | cytosol, nucleus, plastid | 5.79 | 32.53 |
| AT2G17305.1 | Thale cress | cytosol | 17.81 | 30.63 |
| CDY66300 | Canola | cytosol | 30.26 | 30.26 |
| Bra014407.1-P | Field mustard | cytosol | 30.04 | 30.04 |
| CDX93984 | Canola | cytosol, nucleus, plasma membrane, plastid | 17.38 | 29.89 |
| CDY70831 | Canola | plasma membrane | 24.03 | 29.87 |
| CDY49279 | Canola | extracellular | 21.03 | 29.79 |
| CDX72454 | Canola | extracellular | 21.03 | 29.79 |
| Bra017630.1-P | Field mustard | extracellular | 20.82 | 29.48 |
| Bra004102.1-P | Field mustard | plasma membrane | 20.17 | 29.28 |
| CDY16442 | Canola | plasma membrane | 20.17 | 28.75 |
| Bra039758.1-P | Field mustard | plasma membrane | 28.54 | 28.3 |
| CDY16441 | Canola | plasma membrane | 28.54 | 28.3 |
| AT3G29830.1 | Thale cress | cytosol | 28.11 | 28.23 |
| Bra029003.1-P | Field mustard | cytosol, plasma membrane, plastid | 28.33 | 28.03 |
| AT1G56400.1 | Thale cress | cytosol, endoplasmic reticulum, plastid | 28.76 | 27.97 |
| CDY52573 | Canola | plasma membrane, vacuole | 28.11 | 27.87 |
| AT5G54820.1 | Thale cress | plasma membrane | 28.11 | 27.75 |
| CDY07436 | Canola | plasma membrane | 27.9 | 27.66 |
| CDX75406 | Canola | endoplasmic reticulum, plastid | 19.74 | 27.46 |
| Bra011503.1-P | Field mustard | extracellular, plastid | 19.74 | 27.46 |
| CDY61650 | Canola | plasma membrane | 27.68 | 27.45 |
| CDX69031 | Canola | endoplasmic reticulum, plastid | 19.53 | 27.25 |
| AT3G62230.1 | Thale cress | endoplasmic reticulum | 26.82 | 27.11 |
| Bra009781.1-P | Field mustard | plasma membrane | 26.82 | 26.6 |
| Bra004104.1-P | Field mustard | cytosol | 7.51 | 25.0 |
| CDY58678 | Canola | cytosol | 7.08 | 23.57 |
Protein Annotations
| EntrezGene:102659419 | MapMan:35.1 | EMBL:ACUP02001288 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:FBD |
| EnsemblPlantsGene:GLYMA_02G289100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1JJ69 | InterPro:IPR001810 |
| EnsemblPlants:KRH73711 | ProteinID:KRH73711 | ProteinID:KRH73711.1 | PFAM:PF00646 | PFAM:PF08387 | PANTHER:PTHR31639 |
| SMART:SM00256 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | SignalP:SignalP-noTM | UniParc:UPI00023BD8D7 | : |
Description
hypothetical protein
Coordinates
chr2:+:46905676..46907622
Molecular Weight (calculated)
53774.8 Da
IEP (calculated)
4.433
GRAVY (calculated)
0.085
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSSDCFCL LPIEVVLTIL SLLPFKEVVR TCVLSKDWLD ICKSTPNIEF NELFFVKPDQ SNETREAQRR AFLEFIKSWI ENHKGATIDK FSLSLSMPAN
101: VGEIINESVA FATQRGVKEL DLDFVDRSKN ENGDCSYDSD EALFELPSRV YEHISLESLK LYSCSFIETK VLNFHALKEV SLGWMEVRLT AIKAFLFNCK
201: KLECLSFTRC WNSDKFDLGE EEHMGLTKLF LDKCNFDFDY FRVKAPNLKI FKYCGWINFA VVEIDSLAME EVDLDFSLES SFEEFGHPIY NLVKDVCTAR
301: VLTVCSFVLQ VIPTGPEQLR MEVDMDARHL IMKTALDDDE FIGISFFLNS CPLLERLTIE IGPKSELSDY EPAFEFTSLL FWIEYLNVCE CLISSLEVVE
401: INGFRGTLNE YRFLEYLIFS GYVLKKIIIN MLKDDSGRTV EYYCRHMAEL LLTCPCTSRN LEISIF
101: VGEIINESVA FATQRGVKEL DLDFVDRSKN ENGDCSYDSD EALFELPSRV YEHISLESLK LYSCSFIETK VLNFHALKEV SLGWMEVRLT AIKAFLFNCK
201: KLECLSFTRC WNSDKFDLGE EEHMGLTKLF LDKCNFDFDY FRVKAPNLKI FKYCGWINFA VVEIDSLAME EVDLDFSLES SFEEFGHPIY NLVKDVCTAR
301: VLTVCSFVLQ VIPTGPEQLR MEVDMDARHL IMKTALDDDE FIGISFFLNS CPLLERLTIE IGPKSELSDY EPAFEFTSLL FWIEYLNVCE CLISSLEVVE
401: INGFRGTLNE YRFLEYLIFS GYVLKKIIIN MLKDDSGRTV EYYCRHMAEL LLTCPCTSRN LEISIF
001: MTFKRIASSI QQDRLSNLPD VLLIMIISCL SFKECIRTSV LAKRWRYLCR ETRNISFKET EYVDHFVSDK RSKRVSFAAY MCQWVSRYHG RYIETLEIYF
101: SIPSDFLAAV ESLIEFAVSR QVKNLVLDFS DPSWISTSCA SRYDYVCVQL PVCVYSLTTL ESLKIYSCGF DPSKFSNSRL PRKLSIGWIK LTDVESLLLN
201: SPTLKSLSIN YCWGIEIRNI AGDMKEFVFE SCDFSSFMVC CFDLPNVEIF KYSGQILSFD VKRMNMSIKD VILDFTAEGL YEDRNQRTKL EGSVLSAFLN
301: NLRGARTLSV CPYLLQTIQE CEDPFDLLRP METQHLVLRT RLHVMEFKGI KLLLDNCPNL ETLTFDIFSR SLFSYNKSYY GVGPRSYWKK NLTYKSLPKT
401: LKVVVVRNFT GRFGELNVLK FLIQSGRGRW PGREHGPMLE RVELYMDSSM AESQKELADD GAMMLQSISG DVQVLVYDP
101: SIPSDFLAAV ESLIEFAVSR QVKNLVLDFS DPSWISTSCA SRYDYVCVQL PVCVYSLTTL ESLKIYSCGF DPSKFSNSRL PRKLSIGWIK LTDVESLLLN
201: SPTLKSLSIN YCWGIEIRNI AGDMKEFVFE SCDFSSFMVC CFDLPNVEIF KYSGQILSFD VKRMNMSIKD VILDFTAEGL YEDRNQRTKL EGSVLSAFLN
301: NLRGARTLSV CPYLLQTIQE CEDPFDLLRP METQHLVLRT RLHVMEFKGI KLLLDNCPNL ETLTFDIFSR SLFSYNKSYY GVGPRSYWKK NLTYKSLPKT
401: LKVVVVRNFT GRFGELNVLK FLIQSGRGRW PGREHGPMLE RVELYMDSSM AESQKELADD GAMMLQSISG DVQVLVYDP
Arabidopsis Description
Putative F-box/LRR-repeat protein At1g56400 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X8]
SUBAcon: [cytosol,endoplasmic reticulum,plastid]
SUBAcon: [cytosol,endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.