Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH73711 | Soybean | plasma membrane | 46.9 | 29.18 |
CDX93985 | Canola | cytosol, nucleus, plastid | 7.24 | 25.3 |
KRH34702 | Soybean | extracellular, plasma membrane | 37.93 | 23.35 |
KRH46107 | Soybean | endoplasmic reticulum, plasma membrane | 35.86 | 19.73 |
KRH37978 | Soybean | endoplasmic reticulum, plasma membrane | 35.86 | 19.73 |
CDY49279 | Canola | extracellular | 21.38 | 18.84 |
Bra017630.1-P | Field mustard | extracellular | 21.38 | 18.84 |
CDX72454 | Canola | extracellular | 21.38 | 18.84 |
AT3G29830.1 | Thale cress | cytosol | 29.66 | 18.53 |
AT5G54820.1 | Thale cress | plasma membrane | 29.31 | 18.01 |
CDX69031 | Canola | endoplasmic reticulum, plastid | 20.69 | 17.96 |
CDY66300 | Canola | cytosol | 28.62 | 17.81 |
CDX75406 | Canola | endoplasmic reticulum, plastid | 20.34 | 17.61 |
Bra011503.1-P | Field mustard | extracellular, plastid | 20.34 | 17.61 |
CDY16442 | Canola | plasma membrane | 19.66 | 17.43 |
AT1G56400.1 | Thale cress | cytosol, endoplasmic reticulum, plastid | 28.62 | 17.33 |
Bra014407.1-P | Field mustard | cytosol | 27.59 | 17.17 |
AT3G62230.1 | Thale cress | endoplasmic reticulum | 27.24 | 17.14 |
CDY70831 | Canola | plasma membrane | 22.07 | 17.07 |
Bra004102.1-P | Field mustard | plasma membrane | 18.62 | 16.82 |
CDY16441 | Canola | plasma membrane | 26.9 | 16.6 |
Bra039758.1-P | Field mustard | plasma membrane | 26.55 | 16.38 |
CDY61650 | Canola | plasma membrane | 26.21 | 16.17 |
CDY07436 | Canola | plasma membrane | 25.86 | 15.96 |
Bra029003.1-P | Field mustard | cytosol, plasma membrane, plastid | 25.86 | 15.92 |
CDY52573 | Canola | plasma membrane, vacuole | 25.17 | 15.53 |
Bra009781.1-P | Field mustard | plasma membrane | 24.48 | 15.11 |
CDX93984 | Canola | cytosol, nucleus, plasma membrane, plastid | 13.45 | 14.39 |
AT2G17305.1 | Thale cress | cytosol | 13.1 | 14.02 |
Bra004104.1-P | Field mustard | cytosol | 6.55 | 13.57 |
CDY58678 | Canola | cytosol | 5.86 | 12.14 |
Protein Annotations
EMBL:ACUP02001288 | EnsemblPlants:KRH73712 | EnsemblPlantsGene:GLYMA_02G289200 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:FBD | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR31639 |
PFAM:PF08387 | ProteinID:KRH73712 | ProteinID:KRH73712.1 | SUPFAM:SSF81383 | UniParc:UPI0006ED7AC9 | UniProt:A0A0R0L2Z3 |
MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:46909328..46911780
Molecular Weight (calculated)
33413.4 Da
IEP (calculated)
5.073
GRAVY (calculated)
-0.129
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDRISSL PIQLLMTIVS LLPFKESMRA SIISSKWLKA CKLTKNIKEI LRRDLVEFIH FWIDNYKGTV MEKFSLRFSM PGNHDSDIID QCNENNIYYG
101: DYDEALFELP EQQYSCSFVE TEVLNNFHEL KEVSLGWIEV RLSAIKALLS NYNMLESLSF KRCWNLEKFD LGEEQHTEEN LNFSLEYGFE GLGHPLYNTV
201: ISTGLELLGF QSDDMLVQHL IMKTYGFAQE QVLGNHILPQ KLPNVPKKIR FLEVVVINGF SGTENQLLVL MYFIANGDML KSISKKHAEG
101: DYDEALFELP EQQYSCSFVE TEVLNNFHEL KEVSLGWIEV RLSAIKALLS NYNMLESLSF KRCWNLEKFD LGEEQHTEEN LNFSLEYGFE GLGHPLYNTV
201: ISTGLELLGF QSDDMLVQHL IMKTYGFAQE QVLGNHILPQ KLPNVPKKIR FLEVVVINGF SGTENQLLVL MYFIANGDML KSISKKHAEG
001: MTFKRIASSI QQDRLSNLPD VLLIMIISCL SFKECIRTSV LAKRWRYLCR ETRNISFKET EYVDHFVSDK RSKRVSFAAY MCQWVSRYHG RYIETLEIYF
101: SIPSDFLAAV ESLIEFAVSR QVKNLVLDFS DPSWISTSCA SRYDYVCVQL PVCVYSLTTL ESLKIYSCGF DPSKFSNSRL PRKLSIGWIK LTDVESLLLN
201: SPTLKSLSIN YCWGIEIRNI AGDMKEFVFE SCDFSSFMVC CFDLPNVEIF KYSGQILSFD VKRMNMSIKD VILDFTAEGL YEDRNQRTKL EGSVLSAFLN
301: NLRGARTLSV CPYLLQTIQE CEDPFDLLRP METQHLVLRT RLHVMEFKGI KLLLDNCPNL ETLTFDIFSR SLFSYNKSYY GVGPRSYWKK NLTYKSLPKT
401: LKVVVVRNFT GRFGELNVLK FLIQSGRGRW PGREHGPMLE RVELYMDSSM AESQKELADD GAMMLQSISG DVQVLVYDP
101: SIPSDFLAAV ESLIEFAVSR QVKNLVLDFS DPSWISTSCA SRYDYVCVQL PVCVYSLTTL ESLKIYSCGF DPSKFSNSRL PRKLSIGWIK LTDVESLLLN
201: SPTLKSLSIN YCWGIEIRNI AGDMKEFVFE SCDFSSFMVC CFDLPNVEIF KYSGQILSFD VKRMNMSIKD VILDFTAEGL YEDRNQRTKL EGSVLSAFLN
301: NLRGARTLSV CPYLLQTIQE CEDPFDLLRP METQHLVLRT RLHVMEFKGI KLLLDNCPNL ETLTFDIFSR SLFSYNKSYY GVGPRSYWKK NLTYKSLPKT
401: LKVVVVRNFT GRFGELNVLK FLIQSGRGRW PGREHGPMLE RVELYMDSSM AESQKELADD GAMMLQSISG DVQVLVYDP
Arabidopsis Description
Putative F-box/LRR-repeat protein At1g56400 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X8]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.