Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20698 | Sorghum | nucleus | 49.07 | 42.17 |
| VIT_03s0132g00020.t01 | Wine grape | nucleus | 14.87 | 34.19 |
| EES19871 | Sorghum | nucleus | 34.2 | 30.77 |
| KRH30517 | Soybean | nucleus | 30.86 | 28.72 |
| EES20078 | Sorghum | nucleus | 32.71 | 28.66 |
| KRH26575 | Soybean | nucleus | 31.97 | 28.01 |
| VIT_08s0007g03940.t01 | Wine grape | nucleus | 30.86 | 27.85 |
| KRH25160 | Soybean | nucleus | 30.48 | 27.42 |
| PGSC0003DMT400021644 | Potato | nucleus | 28.62 | 26.83 |
| Solyc09g009030.2.1 | Tomato | nucleus | 26.02 | 26.02 |
| VIT_06s0009g03080.t01 | Wine grape | nucleus | 10.78 | 25.89 |
| Os01t0909100-01 | Rice | nucleus, peroxisome | 23.42 | 25.82 |
| KRH22734 | Soybean | nucleus | 18.22 | 25.39 |
| PGSC0003DMT400006927 | Potato | nucleus | 25.28 | 25.28 |
| TraesCS3D01G410300.2 | Wheat | nucleus | 33.83 | 25.0 |
| VIT_06s0061g01240.t01 | Wine grape | nucleus | 32.71 | 24.93 |
| TraesCS3B01G450300.1 | Wheat | nucleus | 34.94 | 24.54 |
| Solyc10g085560.1.1 | Tomato | nucleus | 27.88 | 24.43 |
| KRH67840 | Soybean | nucleus | 26.02 | 24.31 |
| EES04076 | Sorghum | nucleus | 24.91 | 24.19 |
| CDX77140 | Canola | nucleus | 19.33 | 24.19 |
| AT2G27840.3 | Thale cress | cytosol | 18.22 | 24.14 |
| KRG96126 | Soybean | nucleus | 25.28 | 23.21 |
| Bra034373.1-P | Field mustard | nucleus | 18.22 | 22.79 |
| PGSC0003DMT400005672 | Potato | nucleus | 24.16 | 22.41 |
| TraesCS3A01G415200.1 | Wheat | nucleus | 33.46 | 22.33 |
| HORVU3Hr1G092390.4 | Barley | nucleus, plastid | 33.83 | 21.51 |
| Solyc11g066840.1.1 | Tomato | nucleus | 25.28 | 21.45 |
| CDY30525 | Canola | cytosol, nucleus, plastid | 17.47 | 21.36 |
| GSMUA_Achr8P01440_001 | Banana | extracellular | 16.73 | 18.91 |
| PGSC0003DMT400068253 | Potato | cytosol | 22.68 | 17.13 |
Protein Annotations
| EnsemblPlants:KXG33961 | EnsemblPlantsGene:SORBI_3003G396500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR31802 | PANTHER:PTHR31802:SF7 | PFscan:PS50157 | ProteinID:KXG33961 |
| ProteinID:KXG33961.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI00081AEACA | UniProt:A0A1B6Q7S4 |
| MapMan:12.3.2.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:70646814..70650720
Molecular Weight (calculated)
29548.3 Da
IEP (calculated)
5.647
GRAVY (calculated)
-0.867
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIEMPQCGS TGVVVRPGET VKCDPGDSFC HISQIALQAG KGNEDVRIFM KVDGREFLIA TLSDDKYPHH RTDLYLEKEF ELLHSSKTRS ISVIGNNFSN
101: LEIKPDTSSK QGLTAIQSST LEETMDAGKL QTGVGASDDD DSDEDYLDSE GGETSDDEDF SSNEDDEDSP KSAKDKNRPE EKTLKTPPEK KARMTTPGSG
201: TGMRTGYVHV ATPYPSKLVK KTPSIVERPK QPTGYACNSC SRTFNSYIAL KTHCKVKKHK RSPHSSEMS
101: LEIKPDTSSK QGLTAIQSST LEETMDAGKL QTGVGASDDD DSDEDYLDSE GGETSDDEDF SSNEDDEDSP KSAKDKNRPE EKTLKTPPEK KARMTTPGSG
201: TGMRTGYVHV ATPYPSKLVK KTPSIVERPK QPTGYACNSC SRTFNSYIAL KTHCKVKKHK RSPHSSEMS
001: MEFWGVEVKN GKPLHLDPGL DRLVHISQVA LGESKNNVTE PIQLYVTVGS DKLLIGTLSH EKFPQLSTEI VLERNFALSH TWKNGSVFFS GYKVDASDPE
101: PEDLIDDQLE AAGFKAAPKS AAKQVNFQLP NEDVKAKQDD DADGSEEDSS DDDDSENSGD EEEEKVTAES DSEEDDSSDD EEDDSSEEET PKKPEEPKKR
201: SAEPNSSKNP ASNKKAKFVT PQKTDSKKPH VHVATPHPSK QAGKNSGGGS TGETSKQQQT PKSAGAFGCK SCTRTFTSEM GLQSHTKAKH SAAA
101: PEDLIDDQLE AAGFKAAPKS AAKQVNFQLP NEDVKAKQDD DADGSEEDSS DDDDSENSGD EEEEKVTAES DSEEDDSSDD EEDDSSEEET PKKPEEPKKR
201: SAEPNSSKNP ASNKKAKFVT PQKTDSKKPH VHVATPHPSK QAGKNSGGGS TGETSKQQQT PKSAGAFGCK SCTRTFTSEM GLQSHTKAKH SAAA
Arabidopsis Description
HDT3HDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UP12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.