Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- endoplasmic reticulum 3
- extracellular 1
- golgi 1
- plasma membrane 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400087288 | Potato | plastid | 37.33 | 33.73 |
| Solyc09g083300.1.1 | Tomato | nucleus, plastid | 49.33 | 27.72 |
| Solyc09g083310.1.1 | Tomato | nucleus | 41.33 | 15.5 |
| CDY61240 | Canola | nucleus | 16.0 | 13.33 |
| Solyc06g008600.2.1 | Tomato | nucleus | 32.0 | 11.48 |
| Solyc06g084040.2.1 | Tomato | nucleus | 30.67 | 10.67 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 24.0 | 10.47 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 27.33 | 10.3 |
| Solyc09g065990.2.1 | Tomato | nucleus | 29.33 | 10.23 |
| VIT_05s0020g04730.t01 | Wine grape | nucleus | 29.33 | 9.28 |
| KRG92425 | Soybean | nucleus | 25.33 | 8.92 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 28.0 | 8.9 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 28.0 | 8.9 |
| KRH34379 | Soybean | nucleus | 25.33 | 8.72 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 27.33 | 8.65 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 25.33 | 8.64 |
| Zm00001d033322_P001 | Maize | nucleus | 30.0 | 8.56 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 21.33 | 8.53 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 21.33 | 8.53 |
| KXG37982 | Sorghum | nucleus | 29.33 | 8.53 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 28.67 | 8.46 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 29.33 | 8.46 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 28.67 | 8.33 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 26.0 | 8.26 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 28.0 | 8.06 |
| HORVU5Hr1G094160.2 | Barley | plastid | 23.33 | 7.9 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 20.67 | 7.75 |
| Zm00001d041405_P001 | Maize | nucleus | 24.0 | 7.41 |
| Zm00001d030985_P001 | Maize | nucleus | 23.33 | 7.35 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 23.33 | 7.17 |
| OQU79520 | Sorghum | nucleus | 23.33 | 6.34 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 16.0 | 6.17 |
| Os03t0741700-00 | Rice | cytosol | 7.33 | 5.73 |
| Zm00001d013303_P001 | Maize | nucleus | 10.67 | 4.11 |
| Zm00001d033967_P001 | Maize | nucleus | 8.0 | 3.14 |
| Os03t0632800-01 | Rice | nucleus | 8.0 | 2.78 |
Protein Annotations
| EnsemblPlants:Solyc01g020110.1.1 | EnsemblPlantsGene:Solyc01g020110.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR10825 |
| PANTHER:PTHR10825:SF70 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002762D15 | UniProt:K4AUZ3 | MapMan:35.2 |
Description
No Description!
Coordinates
chr1:-:27746407..27747601
Molecular Weight (calculated)
17498.1 Da
IEP (calculated)
9.685
GRAVY (calculated)
-0.007
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMCLCQRDG AEEIKKKKIF LLLLIAVVVM LVVVEEILMW HTFKLLLRQQ EGRPFSLTTN LYPLHKDQDV NKLSSYLKKY LAQKLSLQSE DEVELRMLEM
101: LIRPELPLKH LEKLWLCVAP HSGKRPVKVG ASGEEFVMIL KYSRSHPKLN
101: LIRPELPLKH LEKLWLCVAP HSGKRPVKVG ASGEEFVMIL KYSRSHPKLN
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.