Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g020110.1.1 | Tomato | endoplasmic reticulum | 13.33 | 16.0 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 31.11 | 14.07 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 25.56 | 13.37 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 28.89 | 13.37 |
| PGSC0003DMT400087291 | Potato | nucleus | 22.22 | 12.86 |
| CDY47131 | Canola | nucleus | 29.44 | 12.71 |
| Zm00001d013303_P001 | Maize | nucleus | 27.22 | 12.6 |
| CDY10748 | Canola | nucleus | 29.44 | 12.59 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 30.0 | 12.27 |
| CDX97807 | Canola | nucleus | 27.78 | 12.02 |
| CDY23989 | Canola | nucleus | 28.33 | 11.89 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 23.89 | 11.47 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 23.89 | 11.47 |
| CDY29659 | Canola | nucleus | 26.67 | 11.4 |
| PGSC0003DMT400015657 | Potato | nucleus, plastid | 25.0 | 11.39 |
| Solyc09g083310.1.1 | Tomato | nucleus | 25.0 | 11.25 |
| CDY06664 | Canola | nucleus | 23.89 | 11.23 |
| Os03t0741700-00 | Rice | cytosol | 11.67 | 10.94 |
| KRG92425 | Soybean | nucleus | 25.56 | 10.8 |
| VIT_05s0020g04730.t01 | Wine grape | nucleus | 28.33 | 10.76 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 23.89 | 10.75 |
| Zm00001d030985_P001 | Maize | nucleus | 28.33 | 10.71 |
| Zm00001d041405_P001 | Maize | nucleus | 28.89 | 10.7 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 27.22 | 10.38 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 27.22 | 10.38 |
| KRH34379 | Soybean | nucleus | 25.0 | 10.32 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 28.89 | 10.24 |
| Zm00001d033322_P001 | Maize | nucleus | 29.44 | 10.08 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 28.89 | 10.0 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 28.33 | 9.88 |
| KXG37982 | Sorghum | nucleus | 28.33 | 9.88 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 26.67 | 9.84 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 28.33 | 9.79 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 25.56 | 9.75 |
| Solyc09g083300.1.1 | Tomato | nucleus, plastid | 14.44 | 9.74 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 25.56 | 9.7 |
| Os03t0632800-01 | Rice | nucleus | 21.67 | 9.03 |
| HORVU5Hr1G094160.2 | Barley | plastid | 21.67 | 8.8 |
| OQU79520 | Sorghum | nucleus | 26.67 | 8.7 |
| CDX94870 | Canola | nucleus | 21.67 | 8.69 |
| CDX92974 | Canola | cytosol | 21.11 | 8.21 |
| PGSC0003DMT400010761 | Potato | nucleus | 20.56 | 7.49 |
| Zm00001d033967_P001 | Maize | nucleus | 15.56 | 7.33 |
| PGSC0003DMT400087288 | Potato | plastid | 5.56 | 6.02 |
Protein Annotations
| EnsemblPlants:CDY61240 | EnsemblPlantsGene:GSBRNA2T00030744001 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF70 | ProteinID:CDY61240 | ProteinID:CDY61240.1 |
| UniParc:UPI0004EE27CC | UniProt:A0A078J7U8 | MapMan:35.2 | : | : | : |
Description
BnaCnng37480DBnaCnng37480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7U8]
Coordinates
chrLK033972:-:36022..36940
Molecular Weight (calculated)
19661.3 Da
IEP (calculated)
7.256
GRAVY (calculated)
-0.483
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVRPLTPV KAEEDDARIM SGADKTELTP ALEASSSALL DTKDVNPLTL VADTKEKTSS GNVPNPPLMK RRTRCKQKAH CYGTSSGYRR DNIKTVAPAV
101: RQNATSSAAT GSEKNPIWFT LVALQDQDTD APLPQTPSRY LRVKDSTLPV SYIQKYLAIK LNLESENEVE PAFGSIVVVV
101: RQNATSSAAT GSEKNPIWFT LVALQDQDTD APLPQTPSRY LRVKDSTLPV SYIQKYLAIK LNLESENEVE PAFGSIVVVV
001: MVSAQAGTTR RRTKAPTRKE LRNGSLAERT VKKEESSGDE LLESTSSPDT LNKFTQNKRQ SKKSCKESIS NKENKDGDEP WDSKMDWKPL NFLVEVANGT
101: KPLKSSASQG SGSKSEHANV SRNQFQGSKT KTKNKKRKCK REDDKSNNGD PTTSETVTPK RMRTTQRKRS ATTLGDSRNL PQPDESSAKQ ERRNGPVWFS
201: LVASNDQEGG TSLPQIPANF LRIRDGNTTV SFIQKYLMRK LDLESENEIE IKCMGEAVIP TLTLYNLVDL WLQKSSNHQR FAALVGSSAK DFTMVLVYAR
301: KLPECNM
101: KPLKSSASQG SGSKSEHANV SRNQFQGSKT KTKNKKRKCK REDDKSNNGD PTTSETVTPK RMRTTQRKRS ATTLGDSRNL PQPDESSAKQ ERRNGPVWFS
201: LVASNDQEGG TSLPQIPANF LRIRDGNTTV SFIQKYLMRK LDLESENEIE IKCMGEAVIP TLTLYNLVDL WLQKSSNHQR FAALVGSSAK DFTMVLVYAR
301: KLPECNM
Arabidopsis Description
DRIP1E3 ubiquitin protein ligase DRIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.