Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34379 | Soybean | nucleus | 66.67 | 65.14 |
| Os03t0741700-00 | Rice | cytosol | 14.55 | 32.29 |
| KRG95629 | Soybean | nucleus | 32.39 | 32.24 |
| KRH67309 | Soybean | nucleus | 32.86 | 31.46 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 29.34 | 31.41 |
| KRH34095 | Soybean | nucleus | 31.69 | 31.25 |
| VIT_05s0020g04730.t01 | Wine grape | nucleus | 34.27 | 30.8 |
| KRH32110 | Soybean | nucleus | 30.99 | 30.77 |
| KRG92687 | Soybean | nucleus | 30.99 | 30.48 |
| KRH71326 | Soybean | mitochondrion, nucleus | 30.52 | 30.16 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 30.28 | 29.32 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 23.71 | 25.96 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 22.77 | 25.87 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 22.54 | 25.6 |
| CDY61240 | Canola | nucleus | 10.8 | 25.56 |
| Solyc01g020110.1.1 | Tomato | endoplasmic reticulum | 8.92 | 25.33 |
| Zm00001d030985_P001 | Maize | nucleus | 27.93 | 25.0 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 29.34 | 24.61 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 27.23 | 24.58 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 19.72 | 24.42 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 27.0 | 24.36 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 22.77 | 24.25 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 29.58 | 24.18 |
| Zm00001d041405_P001 | Maize | nucleus | 27.46 | 24.07 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 26.76 | 24.05 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 29.34 | 24.04 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 29.11 | 24.03 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 26.53 | 23.94 |
| HORVU5Hr1G094160.2 | Barley | plastid | 24.65 | 23.7 |
| Zm00001d033322_P001 | Maize | nucleus | 28.64 | 23.19 |
| Zm00001d013303_P001 | Maize | nucleus | 21.13 | 23.14 |
| KXG37982 | Sorghum | nucleus | 27.93 | 23.06 |
| Os03t0632800-01 | Rice | nucleus | 22.3 | 21.99 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 24.88 | 21.72 |
| PGSC0003DMT400087291 | Potato | nucleus | 15.73 | 21.54 |
| OQU79520 | Sorghum | nucleus | 27.7 | 21.38 |
| PGSC0003DMT400010761 | Potato | nucleus | 23.0 | 19.84 |
| Solyc09g083300.1.1 | Tomato | nucleus, plastid | 11.97 | 19.1 |
| Zm00001d033967_P001 | Maize | nucleus | 16.2 | 18.06 |
| Solyc09g083310.1.1 | Tomato | nucleus | 16.9 | 18.0 |
| PGSC0003DMT400015657 | Potato | nucleus, plastid | 16.43 | 17.72 |
| PGSC0003DMT400087288 | Potato | plastid | 6.81 | 17.47 |
Protein Annotations
| MapMan:12.3.5.1.1.1 | Gene3D:3.30.40.10 | UniProt:A0A0R0EE58 | EMBL:ACUP02012753 | EnsemblPlantsGene:GLYMA_20G210200 | InterPro:IPR001841 |
| InterPro:IPR013083 | EnsemblPlants:KRG92425 | ProteinID:KRG92425 | ProteinID:KRG92425.1 | PFAM:PF13923 | ScanProsite:PS00518 |
| PFscan:PS50089 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF42 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0006ED9893 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:-:44619550..44622902
Molecular Weight (calculated)
47189.0 Da
IEP (calculated)
9.040
GRAVY (calculated)
-0.661
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHAGYIQTD IKTITMTIGA AKLNYEKVSA CVACPLCNKF FRNATTISEC CHSFCRECID KKLIDEKLKH CPICNRDLGC SPLDKLRSDP CLQDLRDKIF
101: PFEEQNASVK LNIYRKKNSL SSLKKNAKID KAASKPDKAE DENRGEVEVL EEASSSTIGS ARRAKAAARL KFTCSAPPAA CQLDKVAGED KKDGGHPRGG
201: ETSNGSLKIK IPQNSSKANS SQQSDTNKRD NSEFRNETAD MLEPLNSLVE PGSKKSRKKS TMRSNDNAAD QNESTPSNSD SVQHQRPLSN QEKTLRISED
301: LNFPAQPEIG SNIEGNKEFG PIWFCLVAAE EKKASARLPQ LYSSYLRVKD GSVTVSYIKK YLVKKLGLAS EDEVEITLQG RALLSSLQLR NLVDMWLHTV
401: PKNKIQTFVG SSAKDFIMAL SYGRKT
101: PFEEQNASVK LNIYRKKNSL SSLKKNAKID KAASKPDKAE DENRGEVEVL EEASSSTIGS ARRAKAAARL KFTCSAPPAA CQLDKVAGED KKDGGHPRGG
201: ETSNGSLKIK IPQNSSKANS SQQSDTNKRD NSEFRNETAD MLEPLNSLVE PGSKKSRKKS TMRSNDNAAD QNESTPSNSD SVQHQRPLSN QEKTLRISED
301: LNFPAQPEIG SNIEGNKEFG PIWFCLVAAE EKKASARLPQ LYSSYLRVKD GSVTVSYIKK YLVKKLGLAS EDEVEITLQG RALLSSLQLR NLVDMWLHTV
401: PKNKIQTFVG SSAKDFIMAL SYGRKT
001: MMIKVKKETM RACLSCSICD NILRDATTIS ECLHTFCRKC IYEKITEDEI ETCPVCNIDL GSTPLEKLRP DHNLQDLRAK IFALKRRKVK APGIVSLPGK
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
Arabidopsis Description
DRIP1E3 ubiquitin protein ligase DRIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.